Category Group Index mmcif_ma.dic
Browse:
- ma_alignment
- ma_alignment_details
- ma_alignment_info
- ma_angle_restraints
- ma_associated_archive_file_details
- ma_chem_comp_descriptor
- ma_coevolution_msa
- ma_coevolution_msa_details
- ma_coevolution_seq_db_ref
- ma_data
- ma_data_group
- ma_data_ref_db
- ma_dihedral_restraints
- ma_distance_restraints
- ma_entry_associated_files
- ma_model_list
- ma_poly_template_library_components
- ma_poly_template_library_details
- ma_poly_template_library_list
- ma_protocol_step
- ma_qa_metric
- ma_qa_metric_global
- ma_qa_metric_local
- ma_qa_metric_local_pairwise
- ma_restraints
- ma_restraints_group
- ma_software_group
- ma_software_parameter
- ma_struct_assembly
- ma_struct_assembly_details
- ma_target_entity
- ma_target_entity_instance
- ma_target_ref_db_details
- ma_target_template_poly_mapping
- ma_template_coord
- ma_template_customized
- ma_template_details
- ma_template_non_poly
- ma_template_poly
- ma_template_poly_segment
- ma_template_ref_db_details
- ma_template_trans_matrix
inclusive_group
The parent category group containing all of the data categories in the macromolecular dictionary.
- atom_site
- atom_site_anisotrop
- atom_sites
- atom_sites_alt
- atom_sites_alt_ens
- atom_sites_alt_gen
- atom_sites_footnote
- atom_type
- audit
- audit_author
- audit_conform
- audit_contact_author
- audit_link
- cell
- cell_measurement
- cell_measurement_refln
- chem_comp
- chem_comp_angle
- chem_comp_atom
- chem_comp_bond
- chem_comp_chir
- chem_comp_chir_atom
- chem_comp_link
- chem_comp_plane
- chem_comp_plane_atom
- chem_comp_tor
- chem_comp_tor_value
- chem_link
- chem_link_angle
- chem_link_bond
- chem_link_chir
- chem_link_chir_atom
- chem_link_plane
- chem_link_plane_atom
- chem_link_tor
- chem_link_tor_value
- chemical
- chemical_conn_atom
- chemical_conn_bond
- chemical_formula
- citation
- citation_author
- citation_editor
- computing
- database
- database_2
- database_PDB_caveat
- database_PDB_matrix
- database_PDB_remark
- database_PDB_rev
- database_PDB_rev_record
- database_PDB_tvect
- diffrn
- diffrn_attenuator
- diffrn_detector
- diffrn_measurement
- diffrn_orient_matrix
- diffrn_orient_refln
- diffrn_radiation
- diffrn_radiation_wavelength
- diffrn_refln
- diffrn_reflns
- diffrn_reflns_class
- diffrn_scale_group
- diffrn_source
- diffrn_standard_refln
- diffrn_standards
- em_2d_crystal_entity
- em_2d_projection_selection
- em_3d_crystal_entity
- em_3d_fitting
- em_3d_fitting_list
- em_3d_reconstruction
- em_admin
- em_assembly
- em_author_list
- em_buffer
- em_buffer_component
- em_crystal_formation
- em_ctf_correction
- em_db_reference
- em_db_reference_auxiliary
- em_depositor_info
- em_depui
- em_detector
- em_diffraction
- em_diffraction_shell
- em_diffraction_stats
- em_embedding
- em_entity_assembly
- em_entity_assembly_molwt
- em_entity_assembly_naturalsource
- em_entity_assembly_recombinant
- em_entity_assembly_synthetic
- em_euler_angle_assignment
- em_experiment
- em_fiducial_markers
- em_figure_depositor_info
- em_final_classification
- em_focused_ion_beam
- em_fsc_curve
- em_grid_pretreatment
- em_helical_entity
- em_high_pressure_freezing
- em_image_processing
- em_image_recording
- em_image_scans
- em_imaging
- em_imaging_optics
- em_interpret_figure
- em_layer_lines
- em_layer_lines_depositor_info
- em_map
- em_map_depositor_info
- em_mask_depositor_info
- em_obsolete
- em_particle_selection
- em_sample_preparation
- em_sample_support
- em_shadowing
- em_single_particle_entity
- em_software
- em_specimen
- em_staining
- em_start_model
- em_structure_factors
- em_structure_factors_depositor_info
- em_supersede
- em_support_film
- em_tomography
- em_tomography_specimen
- em_ultramicrotomy
- em_virus_entity
- em_virus_natural_host
- em_virus_shell
- em_virus_synthetic
- em_vitrification
- em_volume_selection
- entity
- entity_keywords
- entity_link
- entity_name_com
- entity_name_sys
- entity_poly
- entity_poly_seq
- entity_src_gen
- entity_src_nat
- entry
- entry_link
- exptl
- exptl_crystal
- exptl_crystal_face
- exptl_crystal_grow
- exptl_crystal_grow_comp
- geom
- geom_angle
- geom_bond
- geom_contact
- geom_hbond
- geom_torsion
- journal
- journal_index
- ma_alignment
- ma_alignment_details
- ma_alignment_info
- ma_angle_restraints
- ma_associated_archive_file_details
- ma_chem_comp_descriptor
- ma_coevolution_msa
- ma_coevolution_msa_details
- ma_coevolution_seq_db_ref
- ma_data
- ma_data_group
- ma_data_ref_db
- ma_dihedral_restraints
- ma_distance_restraints
- ma_entry_associated_files
- ma_model_list
- ma_poly_template_library_components
- ma_poly_template_library_details
- ma_poly_template_library_list
- ma_protocol_step
- ma_qa_metric
- ma_qa_metric_global
- ma_qa_metric_local
- ma_qa_metric_local_pairwise
- ma_restraints
- ma_restraints_group
- ma_software_group
- ma_software_parameter
- ma_struct_assembly
- ma_struct_assembly_details
- ma_target_entity
- ma_target_entity_instance
- ma_target_ref_db_details
- ma_target_template_poly_mapping
- ma_template_coord
- ma_template_customized
- ma_template_details
- ma_template_non_poly
- ma_template_poly
- ma_template_poly_segment
- ma_template_ref_db_details
- ma_template_trans_matrix
- ndb_original_ndb_coordinates
- ndb_struct_conf_na
- ndb_struct_feature_na
- ndb_struct_na_base_pair
- ndb_struct_na_base_pair_step
- pdbx_SG_project
- pdbx_atlas
- pdbx_atom_site_aniso_tls
- pdbx_audit
- pdbx_audit_author
- pdbx_audit_conform
- pdbx_audit_conform_extension
- pdbx_audit_revision_category
- pdbx_audit_revision_details
- pdbx_audit_revision_group
- pdbx_audit_revision_history
- pdbx_audit_revision_item
- pdbx_audit_support
- pdbx_bond_distance_limits
- pdbx_buffer
- pdbx_buffer_components
- pdbx_chem_comp_atom_edit
- pdbx_chem_comp_atom_feature
- pdbx_chem_comp_audit
- pdbx_chem_comp_bond_edit
- pdbx_chem_comp_depositor_info
- pdbx_chem_comp_descriptor
- pdbx_chem_comp_feature
- pdbx_chem_comp_identifier
- pdbx_chem_comp_import
- pdbx_chem_comp_instance_depositor_info
- pdbx_chem_comp_model
- pdbx_chem_comp_model_atom
- pdbx_chem_comp_model_audit
- pdbx_chem_comp_model_bond
- pdbx_chem_comp_model_descriptor
- pdbx_chem_comp_model_feature
- pdbx_chem_comp_model_reference
- pdbx_chem_comp_nonstandard
- pdbx_chem_comp_subcomponent_entity_list
- pdbx_chem_comp_subcomponent_struct_conn
- pdbx_chem_comp_synonyms
- pdbx_chem_comp_upload_depositor_info
- pdbx_columninfo
- pdbx_connect
- pdbx_connect_atom
- pdbx_connect_modification
- pdbx_connect_type
- pdbx_construct
- pdbx_construct_feature
- pdbx_contact_author
- pdbx_coord
- pdbx_coordinate_model
- pdbx_crystal_alignment
- pdbx_data_processing_cell
- pdbx_data_processing_detector
- pdbx_data_processing_reflns
- pdbx_data_processing_status
- pdbx_data_usage
- pdbx_database_PDB_master
- pdbx_database_PDB_obs_spr
- pdbx_database_doi
- pdbx_database_message
- pdbx_database_pdb_omit
- pdbx_database_proc
- pdbx_database_related
- pdbx_database_remark
- pdbx_database_status
- pdbx_database_status_history
- pdbx_dbref
- pdbx_dcc_density
- pdbx_dcc_density_corr
- pdbx_dcc_geometry
- pdbx_dcc_map
- pdbx_dcc_mapman
- pdbx_dcc_rscc_mapman
- pdbx_dcc_rscc_mapman_overall
- pdbx_deposit_group
- pdbx_deposit_group_index
- pdbx_deposition_message_file_reference
- pdbx_deposition_message_info
- pdbx_depui_entity_features
- pdbx_depui_entity_status_flags
- pdbx_depui_entry_details
- pdbx_depui_status_flags
- pdbx_depui_upload
- pdbx_depui_validation_status_flags
- pdbx_diffrn_reflns_shell
- pdbx_distant_solvent_atoms
- pdbx_domain
- pdbx_domain_range
- pdbx_drug_info
- pdbx_entity_assembly
- pdbx_entity_branch_descriptor
- pdbx_entity_func_bind_mode
- pdbx_entity_func_enzyme
- pdbx_entity_func_other
- pdbx_entity_func_regulatory
- pdbx_entity_func_structural
- pdbx_entity_instance_feature
- pdbx_entity_name
- pdbx_entity_name_instance
- pdbx_entity_name_taxonomy
- pdbx_entity_name_taxonomy_tree
- pdbx_entity_nonpoly
- pdbx_entity_poly_comp_link_list
- pdbx_entity_poly_domain
- pdbx_entity_poly_na_nonstandard
- pdbx_entity_poly_na_type
- pdbx_entity_poly_protein_class
- pdbx_entity_prod_protocol
- pdbx_entity_src_gen_character
- pdbx_entity_src_gen_chrom
- pdbx_entity_src_gen_clone
- pdbx_entity_src_gen_clone_ligation
- pdbx_entity_src_gen_clone_recombination
- pdbx_entity_src_gen_depositor_info
- pdbx_entity_src_gen_express
- pdbx_entity_src_gen_express_timepoint
- pdbx_entity_src_gen_fract
- pdbx_entity_src_gen_lysis
- pdbx_entity_src_gen_prod_digest
- pdbx_entity_src_gen_prod_other
- pdbx_entity_src_gen_prod_other_parameter
- pdbx_entity_src_gen_prod_pcr
- pdbx_entity_src_gen_proteolysis
- pdbx_entity_src_gen_pure
- pdbx_entity_src_gen_refold
- pdbx_entity_src_syn
- pdbx_entry_details
- pdbx_exptl_crystal_cryo_treatment
- pdbx_exptl_crystal_grow_comp
- pdbx_exptl_crystal_grow_sol
- pdbx_exptl_pd
- pdbx_family_group_index
- pdbx_family_prd_audit
- pdbx_feature_assembly
- pdbx_feature_domain
- pdbx_feature_entry
- pdbx_feature_monomer
- pdbx_feature_sequence_range
- pdbx_helical_symmetry
- pdbx_helical_symmetry_depositor_info
- pdbx_hybrid
- pdbx_inhibitor_info
- pdbx_initial_refinement_model
- pdbx_investigation
- pdbx_ion_info
- pdbx_linked_entity
- pdbx_linked_entity_instance_list
- pdbx_linked_entity_link_list
- pdbx_linked_entity_list
- pdbx_missing_atom_nonpoly
- pdbx_missing_atom_poly
- pdbx_missing_residue_list
- pdbx_molecule
- pdbx_molecule_features
- pdbx_molecule_features_depositor_info
- pdbx_na_strand_info
- pdbx_na_struct_keywds
- pdbx_nmr_assigned_chem_shift_list
- pdbx_nmr_chem_shift_experiment
- pdbx_nmr_chem_shift_ref
- pdbx_nmr_chem_shift_reference
- pdbx_nmr_chem_shift_software
- pdbx_nmr_computing
- pdbx_nmr_constraint_file
- pdbx_nmr_constraints
- pdbx_nmr_details
- pdbx_nmr_ensemble
- pdbx_nmr_ensemble_rms
- pdbx_nmr_exptl
- pdbx_nmr_exptl_sample
- pdbx_nmr_exptl_sample_conditions
- pdbx_nmr_force_constants
- pdbx_nmr_refine
- pdbx_nmr_representative
- pdbx_nmr_sample_details
- pdbx_nmr_software
- pdbx_nmr_software_task
- pdbx_nmr_spectral_dim
- pdbx_nmr_spectral_peak_list
- pdbx_nmr_spectral_peak_software
- pdbx_nmr_spectrometer
- pdbx_nmr_systematic_chem_shift_offset
- pdbx_nmr_upload
- pdbx_nonpoly_scheme
- pdbx_nonstandard_list
- pdbx_pdb_compnd
- pdbx_pdb_source
- pdbx_phasing_MAD_set
- pdbx_phasing_MAD_set_shell
- pdbx_phasing_MAD_set_site
- pdbx_phasing_MAD_shell
- pdbx_phasing_MR
- pdbx_phasing_dm
- pdbx_phasing_dm_shell
- pdbx_point_symmetry
- pdbx_point_symmetry_depositor_info
- pdbx_poly_seq_scheme
- pdbx_post_process_details
- pdbx_post_process_status
- pdbx_prd_audit
- pdbx_prerelease_seq
- pdbx_protein_info
- pdbx_re_refinement
- pdbx_reference_entity_link
- pdbx_reference_entity_list
- pdbx_reference_entity_nonpoly
- pdbx_reference_entity_poly
- pdbx_reference_entity_poly_link
- pdbx_reference_entity_poly_seq
- pdbx_reference_entity_sequence
- pdbx_reference_entity_src_nat
- pdbx_reference_entity_subcomponents
- pdbx_reference_linked_entity
- pdbx_reference_linked_entity_comp_link
- pdbx_reference_linked_entity_comp_list
- pdbx_reference_linked_entity_link
- pdbx_reference_molecule
- pdbx_reference_molecule_annotation
- pdbx_reference_molecule_details
- pdbx_reference_molecule_family
- pdbx_reference_molecule_features
- pdbx_reference_molecule_list
- pdbx_reference_molecule_related_structures
- pdbx_reference_molecule_synonyms
- pdbx_reference_publication_list
- pdbx_refine
- pdbx_refine_aux_file
- pdbx_refine_component
- pdbx_refine_ls_restr_ncs
- pdbx_refine_tls
- pdbx_refine_tls_group
- pdbx_reflns_twin
- pdbx_related_exp_data_set
- pdbx_remediation_atom_site_mapping
- pdbx_rmch_outlier
- pdbx_rms_devs_cov_by_monomer
- pdbx_rms_devs_covalent
- pdbx_robot_system
- pdbx_seq_map_depositor_info
- pdbx_sequence_annotation
- pdbx_sequence_pattern
- pdbx_sequence_range
- pdbx_sifts_unp_segments
- pdbx_sifts_xref_db
- pdbx_sifts_xref_db_segments
- pdbx_soln_scatter
- pdbx_soln_scatter_model
- pdbx_solvent_atom_site_mapping
- pdbx_solvent_info
- pdbx_source
- pdbx_stereochemistry
- pdbx_struct_assembly
- pdbx_struct_assembly_auth_classification
- pdbx_struct_assembly_auth_evidence
- pdbx_struct_assembly_auth_evidence_depositor_info
- pdbx_struct_assembly_depositor_info
- pdbx_struct_assembly_gen
- pdbx_struct_assembly_gen_depositor_info
- pdbx_struct_assembly_prop
- pdbx_struct_assembly_prop_depositor_info
- pdbx_struct_asym_gen
- pdbx_struct_biol_func
- pdbx_struct_chem_comp_diagnostics
- pdbx_struct_chem_comp_feature
- pdbx_struct_conn_angle
- pdbx_struct_entity_inst
- pdbx_struct_group_component_range
- pdbx_struct_group_components
- pdbx_struct_group_list
- pdbx_struct_info
- pdbx_struct_legacy_oper_list
- pdbx_struct_link
- pdbx_struct_mod_residue
- pdbx_struct_msym_gen
- pdbx_struct_ncs_virus_gen
- pdbx_struct_oper_list
- pdbx_struct_oper_list_depositor_info
- pdbx_struct_pack_gen
- pdbx_struct_ref_seq_deletion
- pdbx_struct_ref_seq_depositor_info
- pdbx_struct_ref_seq_dif_depositor_info
- pdbx_struct_ref_seq_feature
- pdbx_struct_ref_seq_feature_prop
- pdbx_struct_ref_seq_insertion
- pdbx_struct_sheet_hbond
- pdbx_struct_special_symmetry
- pdbx_sugar_phosphate_geometry
- pdbx_summary_flags
- pdbx_supporting_exp_data_set
- pdbx_tableinfo
- pdbx_trna_info
- pdbx_unobs_or_zero_occ_atoms
- pdbx_unobs_or_zero_occ_residues
- pdbx_unpair
- pdbx_val_angle
- pdbx_val_bond
- pdbx_val_chiral
- pdbx_val_contact
- pdbx_val_sym_contact
- pdbx_validate_chiral
- pdbx_validate_close_contact
- pdbx_validate_main_chain_plane
- pdbx_validate_peptide_omega
- pdbx_validate_planes
- pdbx_validate_planes_atom
- pdbx_validate_polymer_linkage
- pdbx_validate_rmsd_angle
- pdbx_validate_rmsd_bond
- pdbx_validate_symm_contact
- pdbx_validate_torsion
- pdbx_version
- pdbx_view_category
- pdbx_view_category_group
- pdbx_view_item
- pdbx_virtual_angle
- pdbx_virtual_bond
- pdbx_virtual_torsion
- pdbx_xplor_file
- phasing
- phasing_MAD
- phasing_MAD_clust
- phasing_MAD_expt
- phasing_MAD_ratio
- phasing_MAD_set
- phasing_MIR
- phasing_MIR_der
- phasing_MIR_der_refln
- phasing_MIR_der_shell
- phasing_MIR_der_site
- phasing_MIR_shell
- phasing_averaging
- phasing_isomorphous
- phasing_set
- phasing_set_refln
- publ
- publ_author
- publ_body
- publ_manuscript_incl
- refine
- refine_B_iso
- refine_analyze
- refine_funct_minimized
- refine_hist
- refine_ls_class
- refine_ls_restr
- refine_ls_restr_ncs
- refine_ls_restr_type
- refine_ls_shell
- refine_occupancy
- refln
- refln_sys_abs
- reflns
- reflns_class
- reflns_scale
- reflns_shell
- software
- space_group
- space_group_symop
- struct
- struct_asym
- struct_biol
- struct_biol_gen
- struct_biol_keywords
- struct_biol_view
- struct_conf
- struct_conf_type
- struct_conn
- struct_conn_type
- struct_keywords
- struct_mon_details
- struct_mon_nucl
- struct_mon_prot
- struct_mon_prot_cis
- struct_ncs_dom
- struct_ncs_dom_lim
- struct_ncs_ens
- struct_ncs_ens_gen
- struct_ncs_oper
- struct_ref
- struct_ref_seq
- struct_ref_seq_dif
- struct_sheet
- struct_sheet_hbond
- struct_sheet_order
- struct_sheet_range
- struct_sheet_topology
- struct_site
- struct_site_gen
- struct_site_keywords
- struct_site_view
- symmetry
- symmetry_equiv
- valence_param
- valence_ref
audit_group
Categories that describe dictionary maintenance and identification.
- audit
- audit_author
- audit_conform
- audit_contact_author
- audit_link
- pdbx_SG_project
- pdbx_audit
- pdbx_audit_author
- pdbx_audit_conform_extension
- pdbx_audit_revision_category
- pdbx_audit_revision_details
- pdbx_audit_revision_group
- pdbx_audit_revision_history
- pdbx_audit_revision_item
- pdbx_audit_support
- pdbx_chem_comp_audit
- pdbx_contact_author
- pdbx_deposit_group
- pdbx_deposit_group_index
- pdbx_version
chemical_group
Categories that describe chemical features derived from the experimental coordinate data.
chem_comp_group
Categories that define the chemical structure and nomenclature of the momoners and ligands in the experiment.
- chem_comp
- chem_comp_angle
- chem_comp_atom
- chem_comp_bond
- chem_comp_chir
- chem_comp_chir_atom
- chem_comp_plane
- chem_comp_plane_atom
- chem_comp_tor
- chem_comp_tor_value
- pdbx_chem_comp_atom_edit
- pdbx_chem_comp_atom_feature
- pdbx_chem_comp_audit
- pdbx_chem_comp_bond_edit
- pdbx_chem_comp_depositor_info
- pdbx_chem_comp_descriptor
- pdbx_chem_comp_feature
- pdbx_chem_comp_identifier
- pdbx_chem_comp_import
- pdbx_chem_comp_nonstandard
- pdbx_chem_comp_subcomponent_entity_list
- pdbx_chem_comp_subcomponent_struct_conn
- pdbx_chem_comp_synonyms
- pdbx_chem_comp_upload_depositor_info
chem_comp_dictionary_group
Categories defining chemical structure and nomenclature of the momoners and ligands used in the Chemical Component Dictionary.
chem_comp_model_group
Categories describing experimental and computational models for individual chemical components.
bird_dictionary_group
Categories defining chemical structure and nomenclature of the small polymer molecules used in the Biologically Interesting Molecule Reference Dictionary (BIRD).
- pdbx_prd_audit
- pdbx_reference_entity_link
- pdbx_reference_entity_list
- pdbx_reference_entity_nonpoly
- pdbx_reference_entity_poly
- pdbx_reference_entity_poly_link
- pdbx_reference_entity_poly_seq
- pdbx_reference_entity_sequence
- pdbx_reference_entity_src_nat
- pdbx_reference_entity_subcomponents
- pdbx_reference_molecule
bird_family_dictionary_group
Categories defining families of related molecules used in the Biologically Interesting Molecule Reference Dictionary (BIRD).
chem_link_group
Categories that describe links between components of chemical structure.
computing_group
Categories that describe the computational details of the experiment.
compliance_group
Categories that are included in this dictionary specifically to comply with previous dictionaries.
database_group
Categories that hold references to entries in databases that contain related information.
- database_2
- database_PDB_caveat
- database_PDB_matrix
- database_PDB_remark
- database_PDB_rev
- database_PDB_rev_record
- database_PDB_tvect
- pdbx_atlas
- pdbx_coord
- pdbx_database_PDB_master
- pdbx_database_PDB_obs_spr
- pdbx_database_message
- pdbx_database_pdb_omit
- pdbx_database_proc
- pdbx_database_related
- pdbx_database_remark
- pdbx_database_status
- pdbx_database_status_history
- pdbx_dbref
- pdbx_reference_publication_list
- pdbx_related_exp_data_set
- pdbx_summary_flags
- pdbx_supporting_exp_data_set
diffrn_group
Categories that describe details of the diffraction experiment.
- em_2d_crystal_entity
- em_3d_crystal_entity
- em_3d_fitting
- em_3d_fitting_list
- em_3d_reconstruction
- em_buffer
- em_buffer_component
- em_crystal_formation
- em_ctf_correction
- em_detector
- em_diffraction
- em_diffraction_shell
- em_diffraction_stats
- em_embedding
- em_entity_assembly
- em_entity_assembly_molwt
- em_entity_assembly_naturalsource
- em_entity_assembly_recombinant
- em_entity_assembly_synthetic
- em_euler_angle_assignment
- em_experiment
- em_final_classification
- em_grid_pretreatment
- em_helical_entity
- em_image_processing
- em_image_recording
- em_image_scans
- em_imaging
- em_imaging_optics
- em_particle_selection
- em_sample_support
- em_shadowing
- em_single_particle_entity
- em_software
- em_specimen
- em_staining
- em_start_model
- em_support_film
- em_tomography
- em_virus_entity
- em_virus_natural_host
- em_virus_shell
- em_virus_synthetic
- em_vitrification
- em_volume_selection
em_legacy_group
Categories that describe 3-dimensional electron microscopy (legacy).
emdb_admin_group
Administrative Categories for Electron Microscopy Data Bank.
- em_admin
- em_author_list
- em_db_reference
- em_db_reference_auxiliary
- em_depositor_info
- em_depui
- em_figure_depositor_info
- em_fsc_curve
- em_interpret_figure
- em_layer_lines
- em_layer_lines_depositor_info
- em_map
- em_map_depositor_info
- em_mask_depositor_info
- em_obsolete
- em_structure_factors
- em_structure_factors_depositor_info
- em_supersede
emdb_extension_group
Categories that describe 3-dimensional electron microscopy (EMDB extension).
entity_group
Categories that describe the unique chemical and molecular entities.
- entity
- entity_keywords
- entity_name_com
- entity_name_sys
- entity_poly
- entity_poly_seq
- entity_src_gen
- entity_src_nat
- pdbx_construct
- pdbx_construct_feature
- pdbx_entity_assembly
- pdbx_entity_branch_descriptor
- pdbx_entity_func_bind_mode
- pdbx_entity_func_enzyme
- pdbx_entity_func_other
- pdbx_entity_func_regulatory
- pdbx_entity_func_structural
- pdbx_entity_name
- pdbx_entity_name_instance
- pdbx_entity_name_taxonomy
- pdbx_entity_name_taxonomy_tree
- pdbx_entity_nonpoly
- pdbx_entity_poly_comp_link_list
- pdbx_entity_poly_domain
- pdbx_entity_poly_na_nonstandard
- pdbx_entity_poly_na_type
- pdbx_entity_poly_protein_class
- pdbx_entity_prod_protocol
- pdbx_entity_src_gen_character
- pdbx_entity_src_gen_chrom
- pdbx_entity_src_gen_clone
- pdbx_entity_src_gen_clone_ligation
- pdbx_entity_src_gen_clone_recombination
- pdbx_entity_src_gen_depositor_info
- pdbx_entity_src_gen_express
- pdbx_entity_src_gen_express_timepoint
- pdbx_entity_src_gen_fract
- pdbx_entity_src_gen_lysis
- pdbx_entity_src_gen_prod_digest
- pdbx_entity_src_gen_prod_other
- pdbx_entity_src_gen_prod_other_parameter
- pdbx_entity_src_gen_prod_pcr
- pdbx_entity_src_gen_proteolysis
- pdbx_entity_src_gen_pure
- pdbx_entity_src_gen_refold
- pdbx_entity_src_syn
- pdbx_linked_entity
- pdbx_linked_entity_instance_list
- pdbx_linked_entity_link_list
- pdbx_prerelease_seq
- pdbx_reference_linked_entity
- pdbx_reference_linked_entity_comp_link
- pdbx_reference_linked_entity_comp_list
- pdbx_reference_linked_entity_link
iucr_group
Categories that are used for manuscript submission and internal processing by the staff of the International Union of Crystallography.
nmr_group
Categories that describe Nuclear Magnetic Spectroscopy experiments.
- pdbx_nmr_assigned_chem_shift_list
- pdbx_nmr_chem_shift_experiment
- pdbx_nmr_chem_shift_ref
- pdbx_nmr_chem_shift_reference
- pdbx_nmr_chem_shift_software
- pdbx_nmr_constraint_file
- pdbx_nmr_constraints
- pdbx_nmr_details
- pdbx_nmr_ensemble
- pdbx_nmr_ensemble_rms
- pdbx_nmr_exptl
- pdbx_nmr_exptl_sample
- pdbx_nmr_exptl_sample_conditions
- pdbx_nmr_force_constants
- pdbx_nmr_refine
- pdbx_nmr_representative
- pdbx_nmr_sample_details
- pdbx_nmr_software
- pdbx_nmr_software_task
- pdbx_nmr_spectral_dim
- pdbx_nmr_spectral_peak_list
- pdbx_nmr_spectral_peak_software
- pdbx_nmr_spectrometer
- pdbx_nmr_systematic_chem_shift_offset
- pdbx_nmr_upload
- pdbx_phasing_MAD_set
- pdbx_phasing_MAD_set_shell
- pdbx_phasing_MAD_set_site
- pdbx_phasing_MAD_shell
- pdbx_phasing_MR
- pdbx_phasing_dm
- pdbx_phasing_dm_shell
- phasing
- phasing_MAD
- phasing_MAD_clust
- phasing_MAD_expt
- phasing_MAD_ratio
- phasing_MAD_set
- phasing_MIR
- phasing_MIR_der
- phasing_MIR_der_refln
- phasing_MIR_der_shell
- phasing_MIR_der_site
- phasing_MIR_shell
- phasing_averaging
- phasing_isomorphous
- phasing_set
- phasing_set_refln
- pdbx_refine
- pdbx_refine_aux_file
- pdbx_refine_component
- pdbx_refine_ls_restr_ncs
- pdbx_refine_tls
- pdbx_refine_tls_group
- pdbx_xplor_file
- refine
- refine_B_iso
- refine_analyze
- refine_funct_minimized
- refine_hist
- refine_ls_class
- refine_ls_restr
- refine_ls_restr_ncs
- refine_ls_restr_type
- refine_ls_shell
- refine_occupancy
refln_group
Categories that describe the details of reflection measurements.
struct_group
Categories that contain details about the experimental structure.
- ndb_struct_conf_na
- ndb_struct_feature_na
- ndb_struct_na_base_pair
- ndb_struct_na_base_pair_step
- pdbx_drug_info
- pdbx_entity_instance_feature
- pdbx_hybrid
- pdbx_inhibitor_info
- pdbx_ion_info
- pdbx_na_strand_info
- pdbx_na_struct_keywds
- pdbx_nonpoly_scheme
- pdbx_poly_seq_scheme
- pdbx_protein_info
- pdbx_solvent_info
- pdbx_struct_assembly
- pdbx_struct_assembly_auth_classification
- pdbx_struct_assembly_auth_evidence
- pdbx_struct_assembly_auth_evidence_depositor_info
- pdbx_struct_assembly_depositor_info
- pdbx_struct_assembly_gen
- pdbx_struct_assembly_gen_depositor_info
- pdbx_struct_assembly_prop
- pdbx_struct_assembly_prop_depositor_info
- pdbx_struct_asym_gen
- pdbx_struct_biol_func
- pdbx_struct_chem_comp_diagnostics
- pdbx_struct_chem_comp_feature
- pdbx_struct_conn_angle
- pdbx_struct_entity_inst
- pdbx_struct_group_component_range
- pdbx_struct_group_components
- pdbx_struct_group_list
- pdbx_struct_info
- pdbx_struct_legacy_oper_list
- pdbx_struct_link
- pdbx_struct_msym_gen
- pdbx_struct_ncs_virus_gen
- pdbx_struct_oper_list
- pdbx_struct_oper_list_depositor_info
- pdbx_struct_pack_gen
- pdbx_struct_ref_seq_deletion
- pdbx_struct_ref_seq_depositor_info
- pdbx_struct_ref_seq_dif_depositor_info
- pdbx_struct_ref_seq_feature
- pdbx_struct_ref_seq_feature_prop
- pdbx_struct_ref_seq_insertion
- pdbx_struct_sheet_hbond
- pdbx_trna_info
- pdbx_unpair
- struct
- struct_asym
- struct_biol
- struct_biol_gen
- struct_biol_keywords
- struct_biol_view
- struct_conf
- struct_conf_type
- struct_conn
- struct_conn_type
- struct_keywords
- struct_mon_details
- struct_mon_nucl
- struct_mon_prot
- struct_mon_prot_cis
- struct_ncs_dom
- struct_ncs_dom_lim
- struct_ncs_ens
- struct_ncs_ens_gen
- struct_ncs_oper
- struct_ref
- struct_ref_seq
- struct_ref_seq_dif
- struct_sheet
- struct_sheet_hbond
- struct_sheet_order
- struct_sheet_range
- struct_sheet_topology
- struct_site
- struct_site_gen
- struct_site_keywords
- struct_site_view
pdbx_group
Categories which have been added to support the data archiving and exchange for the Protein Data Bank.
- database_PDB_caveat
- database_PDB_matrix
- database_PDB_remark
- database_PDB_rev
- database_PDB_rev_record
- database_PDB_tvect
- pdbx_audit_author
- pdbx_audit_conform
- pdbx_audit_conform_extension
- pdbx_audit_revision_category
- pdbx_audit_revision_details
- pdbx_audit_revision_group
- pdbx_audit_revision_history
- pdbx_audit_revision_item
- pdbx_audit_support
- pdbx_bond_distance_limits
- pdbx_buffer
- pdbx_buffer_components
- pdbx_chem_comp_atom_edit
- pdbx_chem_comp_atom_feature
- pdbx_chem_comp_audit
- pdbx_chem_comp_bond_edit
- pdbx_chem_comp_depositor_info
- pdbx_chem_comp_descriptor
- pdbx_chem_comp_feature
- pdbx_chem_comp_identifier
- pdbx_chem_comp_import
- pdbx_chem_comp_instance_depositor_info
- pdbx_chem_comp_model
- pdbx_chem_comp_model_atom
- pdbx_chem_comp_model_audit
- pdbx_chem_comp_model_bond
- pdbx_chem_comp_model_descriptor
- pdbx_chem_comp_model_feature
- pdbx_chem_comp_model_reference
- pdbx_chem_comp_subcomponent_entity_list
- pdbx_chem_comp_subcomponent_struct_conn
- pdbx_chem_comp_synonyms
- pdbx_chem_comp_upload_depositor_info
- pdbx_columninfo
- pdbx_construct
- pdbx_construct_feature
- pdbx_coordinate_model
- pdbx_crystal_alignment
- pdbx_data_processing_cell
- pdbx_data_processing_detector
- pdbx_data_processing_reflns
- pdbx_data_processing_status
- pdbx_data_usage
- pdbx_database_PDB_obs_spr
- pdbx_database_doi
- pdbx_database_message
- pdbx_database_proc
- pdbx_database_related
- pdbx_database_remark
- pdbx_database_status
- pdbx_database_status_history
- pdbx_deposit_group
- pdbx_deposit_group_index
- pdbx_deposition_message_file_reference
- pdbx_deposition_message_info
- pdbx_depui_entity_features
- pdbx_depui_entity_status_flags
- pdbx_depui_entry_details
- pdbx_depui_status_flags
- pdbx_depui_upload
- pdbx_depui_validation_status_flags
- pdbx_diffrn_reflns_shell
- pdbx_distant_solvent_atoms
- pdbx_domain
- pdbx_domain_range
- pdbx_entity_assembly
- pdbx_entity_branch_descriptor
- pdbx_entity_instance_feature
- pdbx_entity_name
- pdbx_entity_name_instance
- pdbx_entity_name_taxonomy
- pdbx_entity_name_taxonomy_tree
- pdbx_entity_poly_comp_link_list
- pdbx_entity_prod_protocol
- pdbx_entity_src_gen_character
- pdbx_entity_src_gen_chrom
- pdbx_entity_src_gen_clone
- pdbx_entity_src_gen_clone_ligation
- pdbx_entity_src_gen_clone_recombination
- pdbx_entity_src_gen_express
- pdbx_entity_src_gen_express_timepoint
- pdbx_entity_src_gen_fract
- pdbx_entity_src_gen_lysis
- pdbx_entity_src_gen_prod_digest
- pdbx_entity_src_gen_prod_other
- pdbx_entity_src_gen_prod_other_parameter
- pdbx_entity_src_gen_prod_pcr
- pdbx_entity_src_gen_proteolysis
- pdbx_entity_src_gen_pure
- pdbx_entity_src_gen_refold
- pdbx_entity_src_syn
- pdbx_entry_details
- pdbx_exptl_pd
- pdbx_family_group_index
- pdbx_family_prd_audit
- pdbx_feature_assembly
- pdbx_feature_domain
- pdbx_feature_entry
- pdbx_feature_monomer
- pdbx_feature_sequence_range
- pdbx_helical_symmetry
- pdbx_helical_symmetry_depositor_info
- pdbx_initial_refinement_model
- pdbx_investigation
- pdbx_linked_entity
- pdbx_linked_entity_instance_list
- pdbx_linked_entity_link_list
- pdbx_linked_entity_list
- pdbx_missing_residue_list
- pdbx_molecule
- pdbx_molecule_features
- pdbx_molecule_features_depositor_info
- pdbx_nmr_assigned_chem_shift_list
- pdbx_nmr_chem_shift_experiment
- pdbx_nmr_chem_shift_ref
- pdbx_nmr_chem_shift_reference
- pdbx_nmr_chem_shift_software
- pdbx_nmr_computing
- pdbx_nmr_constraint_file
- pdbx_nmr_constraints
- pdbx_nmr_details
- pdbx_nmr_ensemble
- pdbx_nmr_ensemble_rms
- pdbx_nmr_exptl
- pdbx_nmr_exptl_sample
- pdbx_nmr_exptl_sample_conditions
- pdbx_nmr_force_constants
- pdbx_nmr_refine
- pdbx_nmr_representative
- pdbx_nmr_sample_details
- pdbx_nmr_software
- pdbx_nmr_software_task
- pdbx_nmr_spectral_dim
- pdbx_nmr_spectral_peak_list
- pdbx_nmr_spectral_peak_software
- pdbx_nmr_spectrometer
- pdbx_nmr_systematic_chem_shift_offset
- pdbx_nmr_upload
- pdbx_nonpoly_scheme
- pdbx_pdb_compnd
- pdbx_pdb_source
- pdbx_phasing_MAD_set
- pdbx_phasing_MAD_set_shell
- pdbx_phasing_MAD_set_site
- pdbx_phasing_MAD_shell
- pdbx_phasing_MR
- pdbx_phasing_dm
- pdbx_phasing_dm_shell
- pdbx_point_symmetry
- pdbx_point_symmetry_depositor_info
- pdbx_poly_seq_scheme
- pdbx_post_process_details
- pdbx_post_process_status
- pdbx_prd_audit
- pdbx_prerelease_seq
- pdbx_reference_entity_link
- pdbx_reference_entity_list
- pdbx_reference_entity_nonpoly
- pdbx_reference_entity_poly
- pdbx_reference_entity_poly_link
- pdbx_reference_entity_poly_seq
- pdbx_reference_entity_sequence
- pdbx_reference_entity_src_nat
- pdbx_reference_entity_subcomponents
- pdbx_reference_linked_entity
- pdbx_reference_linked_entity_comp_link
- pdbx_reference_linked_entity_comp_list
- pdbx_reference_linked_entity_link
- pdbx_reference_molecule
- pdbx_reference_molecule_annotation
- pdbx_reference_molecule_details
- pdbx_reference_molecule_family
- pdbx_reference_molecule_features
- pdbx_reference_molecule_list
- pdbx_reference_molecule_related_structures
- pdbx_reference_molecule_synonyms
- pdbx_refine
- pdbx_refine_aux_file
- pdbx_refine_component
- pdbx_refine_ls_restr_ncs
- pdbx_refine_tls
- pdbx_refine_tls_group
- pdbx_related_exp_data_set
- pdbx_remediation_atom_site_mapping
- pdbx_robot_system
- pdbx_seq_map_depositor_info
- pdbx_sequence_annotation
- pdbx_sequence_range
- pdbx_sifts_unp_segments
- pdbx_sifts_xref_db
- pdbx_sifts_xref_db_segments
- pdbx_solvent_atom_site_mapping
- pdbx_struct_assembly
- pdbx_struct_assembly_auth_classification
- pdbx_struct_assembly_auth_evidence
- pdbx_struct_assembly_auth_evidence_depositor_info
- pdbx_struct_assembly_depositor_info
- pdbx_struct_assembly_gen
- pdbx_struct_assembly_gen_depositor_info
- pdbx_struct_assembly_prop_depositor_info
- pdbx_struct_asym_gen
- pdbx_struct_chem_comp_diagnostics
- pdbx_struct_chem_comp_feature
- pdbx_struct_conn_angle
- pdbx_struct_entity_inst
- pdbx_struct_group_component_range
- pdbx_struct_group_components
- pdbx_struct_group_list
- pdbx_struct_legacy_oper_list
- pdbx_struct_mod_residue
- pdbx_struct_msym_gen
- pdbx_struct_oper_list
- pdbx_struct_oper_list_depositor_info
- pdbx_struct_ref_seq_deletion
- pdbx_struct_ref_seq_depositor_info
- pdbx_struct_ref_seq_dif_depositor_info
- pdbx_struct_ref_seq_insertion
- pdbx_struct_sheet_hbond
- pdbx_struct_special_symmetry
- pdbx_supporting_exp_data_set
- pdbx_tableinfo
- pdbx_unobs_or_zero_occ_atoms
- pdbx_unobs_or_zero_occ_residues
- pdbx_validate_chiral
- pdbx_validate_close_contact
- pdbx_validate_main_chain_plane
- pdbx_validate_peptide_omega
- pdbx_validate_planes
- pdbx_validate_planes_atom
- pdbx_validate_polymer_linkage
- pdbx_validate_rmsd_angle
- pdbx_validate_rmsd_bond
- pdbx_validate_symm_contact
- pdbx_validate_torsion
- pdbx_version
- pdbx_xplor_file
pdbx_erf_group
Categories which are used by RCSB PDB to store derived and computed data.
- ndb_original_ndb_coordinates
- ndb_struct_conf_na
- ndb_struct_feature_na
- ndb_struct_na_base_pair
- ndb_struct_na_base_pair_step
- pdbx_atlas
- pdbx_chem_comp_nonstandard
- pdbx_connect
- pdbx_connect_atom
- pdbx_connect_modification
- pdbx_connect_type
- pdbx_coord
- pdbx_database_PDB_master
- pdbx_database_pdb_omit
- pdbx_dbref
- pdbx_drug_info
- pdbx_entity_func_bind_mode
- pdbx_entity_func_enzyme
- pdbx_entity_func_other
- pdbx_entity_func_regulatory
- pdbx_entity_func_structural
- pdbx_entity_nonpoly
- pdbx_entity_poly_domain
- pdbx_entity_poly_na_nonstandard
- pdbx_entity_poly_na_type
- pdbx_entity_poly_protein_class
- pdbx_hybrid
- pdbx_inhibitor_info
- pdbx_ion_info
- pdbx_na_strand_info
- pdbx_na_struct_keywds
- pdbx_nonstandard_list
- pdbx_protein_info
- pdbx_rms_devs_cov_by_monomer
- pdbx_rms_devs_covalent
- pdbx_sequence_pattern
- pdbx_solvent_info
- pdbx_source
- pdbx_stereochemistry
- pdbx_struct_biol_func
- pdbx_struct_ncs_virus_gen
- pdbx_struct_pack_gen
- pdbx_sugar_phosphate_geometry
- pdbx_summary_flags
- pdbx_trna_info
- pdbx_unpair
- pdbx_view_category
- pdbx_view_category_group
- pdbx_view_item
- pdbx_virtual_angle
- pdbx_virtual_bond
- pdbx_virtual_torsion
protein_production_group
Categories which describe the details of protein production.
- pdbx_buffer
- pdbx_buffer_components
- pdbx_construct
- pdbx_construct_feature
- pdbx_entity_prod_protocol
- pdbx_entity_src_gen_character
- pdbx_entity_src_gen_chrom
- pdbx_entity_src_gen_clone
- pdbx_entity_src_gen_clone_ligation
- pdbx_entity_src_gen_clone_recombination
- pdbx_entity_src_gen_express
- pdbx_entity_src_gen_express_timepoint
- pdbx_entity_src_gen_fract
- pdbx_entity_src_gen_lysis
- pdbx_entity_src_gen_prod_digest
- pdbx_entity_src_gen_prod_other
- pdbx_entity_src_gen_prod_other_parameter
- pdbx_entity_src_gen_prod_pcr
- pdbx_entity_src_gen_proteolysis
- pdbx_entity_src_gen_pure
- pdbx_entity_src_gen_refold
- pdbx_robot_system
solution_scattering_group
Categories which describe the details of solution scattering experiments.
validate_group
Categories that describe geometric properties of residues that deviate from expected standards by 6 * the expected RMSD
- pdbx_missing_atom_nonpoly
- pdbx_missing_atom_poly
- pdbx_rmch_outlier
- pdbx_val_angle
- pdbx_val_bond
- pdbx_val_chiral
- pdbx_val_contact
- pdbx_val_sym_contact
- pdbx_validate_chiral
- pdbx_validate_close_contact
- pdbx_validate_main_chain_plane
- pdbx_validate_peptide_omega
- pdbx_validate_planes
- pdbx_validate_planes_atom
- pdbx_validate_polymer_linkage
- pdbx_validate_rmsd_angle
- pdbx_validate_rmsd_bond
- pdbx_validate_symm_contact
- pdbx_validate_torsion