PDBx/mmCIF
A Member of the wwPDB

Data Category geom_hbond

Browse:

General

Category name
geom_hbond
Required in PDB entries
no
Category group membership
geom_group
Used in current PDB entries
No

Category Relationship Diagrams

70
View full category relationship diagram including all dictionary data categories

Category Description 

               Data items in the GEOM_HBOND category record details about
               hydrogen bonds, as calculated from the contents of the ATOM,
               CELL, and SYMMETRY data.

Category Example

View/hide Example 
 
     loop_
    _geom_hbond.atom_site_id_D
    _geom_hbond.atom_site_id_H
    _geom_hbond.atom_site_id_A
    _geom_hbond.dist_DH
    _geom_hbond.dist_HA
    _geom_hbond.dist_DA
    _geom_hbond.angle_DHA
    _geom_hbond.publ_flag

    N6   HN6  OW   0.888(8)  1.921(12)  2.801(8)  169.6(8)  yes
    OW   HO2  O7   0.917(6)  1.923(12)  2.793(8)  153.5(8)  yes
    OW   HO1  N10  0.894(8)  1.886(11)  2.842(8)  179.7(9)  yes

Key Data Items

Category Data Items

View/hide item list