Data Category geom_bond

General

Category name
geom_bond
Required in PDB entries
no
Category group membership
geom_group
Used in current PDB entries
No

Category Relationship Diagrams

70
View full category relationship diagram including all dictionary data categories

Category Description

               Data items in the GEOM_BOND category record details about
               molecular and crystal bonds, as calculated from the contents
               of the ATOM, CELL, and SYMMETRY data.

Category Example

 
     loop_
    _geom_bond.atom_site_id_1
    _geom_bond.atom_site_id_2
    _geom_bond.dist
    _geom_bond.site_symmetry_1
    _geom_bond.site_symmetry_2
    _geom_bond.publ_flag
      O1  C2   1.342(4)  1_555  1_555  yes
      O1  C5   1.439(3)  1_555  1_555  yes
      C2  C3   1.512(4)  1_555  1_555  yes
      C2  O21  1.199(4)  1_555  1_555  yes
      C3  N4   1.465(3)  1_555  1_555  yes
      C3  C31  1.537(4)  1_555  1_555  yes
      C3  H3   1.00(3)   1_555  1_555  ?
      N4  C5   1.472(3)  1_555  1_555  yes
    # - - - - data truncated for brevity - - - -