Data Item _pdbx_vrpt_summary_geometry.clashscore

General

Item name
_pdbx_vrpt_summary_geometry.clashscore
Category name
pdbx_vrpt_summary_geometry
Attribute name
clashscore
Required in PDB entries
no
Used in currrent PDB entries
No

Item Description

This score is derived from the number of pairs of atoms in the PDB_model_num that are unusually close to each other. It is calculated by the MolProbity pdbx_vrpt_software and expressed as the number or such clashes per thousand atoms. For structures determined by NMR the clashscore value here will only consider label_atom_id pairs in the well-defined (core) residues from ensemble analysis.

Data Type

Data type code
float
Data type detail
float item types are the subset of numbers that are the floating numbers.
Primitive data type code
numb
Regular expression
-?(([0-9]+)[.]?|([0-9]*[.][0-9]+))([(][0-9]+[)])?([eE][+-]?[0-9]+)?

Aliases

Alias Item Name Dictionary Name Dictionary Version
_Entry.clashscore http://wwpdb.org/validation/schema/wwpdb_validation_v6.00.xsd V6.00