Supporting Data mmcif_ihm_ext.dic
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Dictionary Revision History
| Version | Revision Date | Revision Description | |
|---|---|---|---|
| 1.26 | 2024-07-11 | + Add "Crosslinking-MS" to the enumeration list of _ihm_dataset_list.data_type + Add "modeling" to the enumeration list of _ihm_dataset_group.application + Update category descriptions of ihm_model_list, ihm_model_group, ihm_model_group_link, ihm_model_representative + Add category "ihm_ordered_model" and deprecate category "ihm_ordered_ensemble" + Update enumerations for _ihm_cross_link_list.linker_type + Update _item_type.code for _ihm_dataset_related_db_reference.accession_code and _ihm_ensemble_info.ensemble_clustering_method + Add "ProteomeXchange" to the enumeration list of _ihm_dataset_related_db_reference.db_name |
mmcif_ihm_ext.dic |
| 1.25 | 2023-12-22 | + Rename dictionary + Reorganize repository |
mmcif_ihm_ext.dic |
| 1.24 | 2023-11-30 | Changes (bv): + Added ihm_multi_state_scheme, ihm_multi_state_scheme_connectivity + Added ihm_kinetic_rate, ihm_relaxation_time, ihm_relaxation_time_multi_state_scheme |
mmcif_ihm_ext.dic |
| 1.23 | 2023-07-05 | Changes (bv): + Added enumerations to _ihm_cross_link_list.linker_type |
mmcif_ihm_ext.dic |
| 1.22 | 2023-05-26 | Changes (bv): + Added enumerations to _ihm_dataset_related_db_reference.db_name |
mmcif_ihm_ext.dic |
| 1.21 | 2023-03-24 | Changes (bv): + Added enumerations to _ihm_cross_link_list.linker_type |
mmcif_ihm_ext.dic |
| 1.20 | 2023-02-19 | Changes (bv): + Updated category keys for ihm_entry_collection_mapping + Added enumerations to _ihm_cross_link_list.linker_type and _ihm_dataset_related_db_reference.db_name + Add nanoseconds to item_units_list |
mmcif_ihm_ext.dic |
| 1.19 | 2023-02-02 | Changes (bv): + Added enumerations to _ihm_cross_link_list.linker_type and _ihm_dataset_related_db_reference.db_name |
mmcif_ihm_ext.dic |
| 1.18 | 2022-12-20 | Changes (bv): + Added _ihm_ensemble_info.model_group_superimposed_flag + Added enumerations to _ihm_dataset_list.data_type and _ihm_ensemble_info.ensemble_clustering_method + Added ihm_entry_collection and ihm_entry_collection_mapping |
mmcif_ihm_ext.dic |
| 1.17 | 2021-05-21 | Changes (bv): + Added enumerations to _ihm_cross_link_list.linker_type |
mmcif_ihm_ext.dic |
| 1.16 | 2021-04-14 | Changes (bv): + Added enumerations to _ihm_cross_link_list.linker_type |
mmcif_ihm_ext.dic |
| 1.15 | 2021-03-16 | Changes (bv): + Added enumerations to _ihm_dataset_related_db_reference.db_name |
mmcif_ihm_ext.dic |
| 1.14 | 2021-03-04 | Changes (bv): + Added enumerations to _ihm_cross_link_list.linker_type |
mmcif_ihm_ext.dic |
| 1.13 | 2021-01-28 | Changes (bv): + Added enumerations to _ihm_cross_link_list.linker_type |
mmcif_ihm_ext.dic |
| 1.12 | 2020-07-10 | Changes (bv): + Added enumerations to _ihm_cross_link_list.linker_type |
mmcif_ihm_ext.dic |
| 1.11 | 2020-07-03 | Changes (bv): + Added ihm_hdx_restraint |
mmcif_ihm_ext.dic |
| 1.10 | 2020-06-04 | Changes (bv): + Added ihm_derived_angle_restraint, ihm_derived_dihedral_restraint + Added _ihm_derived_distance_restraint.distance_threshold_mean + Added _ihm_derived_distance_restraint.distance_threshold_esd + Updated enumeration for _ihm_derived_distance_restraint.restraint_type + Updated enumeration for _ihm_dataset_list.data_type |
mmcif_ihm_ext.dic |
| 1.09 | 2020-03-19 | Changes (bv): + Added ihm_data_transformation + Added _ihm_related_datasets.transformation_id |
mmcif_ihm_ext.dic |
| 1.08 | 2020-02-14 | Changes (bv): + Added _ihm_ensemble_info.sub_sample_flag, _ihm_ensemble_info.sub_sampling_type + Added ihm_ensemble_sub_sample |
mmcif_ihm_ext.dic |
| 1.07 | 2020-02-10 | Changes (bv): + Added CYS to _ihm_cross_link_list.linker_type enumeration list |
mmcif_ihm_ext.dic |
| 1.06 | 2020-01-24 | Changes (bv): + Added _ihm_cross_link_restraint.pseudo_site_flag + Added ihm_cross_link_pseudo_site category + Added ihm_pseudo_site category + Removed _ihm_pseudo_site_feature.Cartn_x, _ihm_pseudo_site_feature.Cartn_y _ihm_pseudo_site_feature.Cartn_z, _ihm_pseudo_site_feature.radius _ihm_pseudo_site_feature.description + Added _ihm_pseudo_site_feature.pseudo_site_id |
mmcif_ihm_ext.dic |
| 1.05 | 2019-11-15 | Changes (bv): + Added BMSO and DHSO to _ihm_cross_link_list.linker_type enumeration list |
mmcif_ihm_ext.dic |
| 1.04 | 2019-10-10 | Changes (bv): + Added _ihm_derived_distance_restraint.mic_value + Added enumeration to _ihm_dataset_list.data_type |
mmcif_ihm_ext.dic |
| 1.03 | 2019-10-03 | Changes (bv): + Changed _ihm_geometric_object_distance_restraint.other_details to _ihm_geometric_object_distance_restraint.details + Removed _ihm_geometric_object_list.other_details and _ihm_geometric_object_half_torus.details |
mmcif_ihm_ext.dic |
| 1.02 | 2019-10-01 | Changes (bv): + Added _ihm_starting_model_details.description, _ihm_starting_comparative_models.details + Added _ihm_model_representation_details.description, _ihm_modeling_protocol_details.description + Added _ihm_modeling_post_process.details, _ihm_ensemble_info.details + Added _ihm_external_reference_info.details, _ihm_cross_link_list.details + Added _ihm_feature_list.details, _ihm_geometric_object_half_torus.details + Added enumerations (DSG and BSP) to _ihm_cross_link_list.linker_type + Updated _item_enumeration.detail for items in _ihm_cross_link_list.linker_type + Updated _item_description.description for _ihm_external_files.details |
mmcif_ihm_ext.dic |
| 1.01 | 2019-07-26 | Changes (bv): + Updated _item_mandatory.code and _pdbx_item.mandatory_code for several data items. + Added _item_sub_category.id in ihm_poly_probe_position. + Added PDB-Dev to the enumeration list in ihm_dataset_related_db_reference.db_name. |
mmcif_ihm_ext.dic |
| 1.0 | 2019-05-31 | Changes (bv): + Updated several categories to fix primary key information and parent-child relationships |
mmcif_ihm_ext.dic |
| 0.141 | 2019-05-06 | Changes (bv): + Added IHM_CHEMICAL_COMPONENT_DESCRIPTOR, IHM_PROBE_LIST, IHM_EPR_RESTRAINT + Added IHM_POLY_PROBE_POSITION, IHM_POLY_PROBE_CONJUGATE + Added IHM_LIGAND_PROBE + Added _ihm_cross_link_list.linker_chem_comp_descriptor_id |
mmcif_ihm_ext.dic |
| 0.140 | 2019-03-11 | Changes (bv): + Added IHM_INTERFACE_RESIDUE_FEATURE + Added _ihm_poly_residue_feature.interface_residue_flag + Updated item_mandatory.code for _ihm_poly_residue_feature.asym_id _ihm_poly_atom_feature.asym_id, _ihm_non_poly_feature.asym_id |
mmcif_ihm_ext.dic |
| 0.139 | 2019-01-03 | Changes (bv): + Changed IHM_FEATURE_PSEUDO_SITE to IHM_PSEUDO_SITE_FEATURE |
mmcif_ihm_ext.dic |
| 0.138 | 2018-12-20 | Changes (bv): + Added _ihm_modeling_protocol.ensemble_flag + Changed _item.type_code from code to ucode for: _ihm_modeling_protocol.multi_scale_flag _ihm_modeling_protocol.multi_state_flag _ihm_modeling_protocol.ordered_flag _ihm_dataset_list.database_hosted _ihm_2dem_class_average_restraint.image_segment_flag _ihm_3dem_restraint.map_segment_flag _ihm_sas_restraint.profile_segment_flag + Updated definitions for _ihm_feature_list.entity_type + Updated enumeration list for _ihm_feature_list.feature_type |
mmcif_ihm_ext.dic |
| 0.137 | 2018-10-26 | Changes (bv): + Renamed IHM_NON_POLY_ATOM_FEATURE to IHM_NON_POLY_FEATURE + Updated _ihm_feature_list.feature_type + Added IHM_FEATURE_PSEUDO_SITE |
mmcif_ihm_ext.dic |
| 0.136 | 2018-10-05 | Changes (bv): + Added ihm_hydroxyl_radical_fp_restraint |
mmcif_ihm_ext.dic |
| 0.135 | 2018-10-04 | Changes (bv): + Added DSSO crosslinker + Updated parent-child relationships for several data items: _ihm_starting_model_details.entity_id, _ihm_model_representation.entity_id, _ihm_struct_assembly.entity_id, _ihm_localization_density_files.entity_id, _ihm_starting_model_coord.entity_id, _ihm_starting_model_coord.comp_id, _ihm_sphere_obj_site.entity_id, _ihm_gaussian_obj_site.entity_id, _ihm_gaussian_obj_ensemble.entity_id + Updated _item_type.code for _ihm_external_files.file_path |
mmcif_ihm_ext.dic |
| 0.134 | 2018-07-18 | Changes (bv): + Updated _item_sub_category.id for matrices and vectors |
mmcif_ihm_ext.dic |
| 0.133 | 2018-06-29 | Changes (bv): + Added IHM_GEOMETRIC_OBJECT_LIST, IHM_GEOMETRIC_OBJECT_CENTER, IHM_GEOMETRIC_OBJECT_TRANSFORMATION + Added IHM_GEOMETRIC_OBJECT_SPHERE, IHM_GEOMETRIC_OBJECT_TORUS, IHM_GEOMETRIC_OBJECT_HALF_TORUS + Added IHM_GEOMETRIC_OBJECT_AXIS, IHM_GEOMETRIC_OBJECT_PLANE, IHM_GEOMETRIC_OBJECT_DISTANCE_RESTRAINT |
mmcif_ihm_ext.dic |
| 0.132 | 2018-05-25 | Changes (bv): + Added IHM_STARTING_COMPUTATIONAL_MODELS + Removed _ihm_starting_comparative_models.software_id, _ihm_starting_comparative_models.script_file_id + Added _ihm_modeling_post_process.script_file_id, _ihm_modeling_protocol.script_file_id |
mmcif_ihm_ext.dic |
| 0.131 | 2018-05-21 | Changes (bv): + Added _ihm_modeling_post_process.software_id, _ihm_modeling_protocol.software_id + Added _ihm_multi_state_modeling.population_fraction_sd + Added _ihm_starting_comparative_models.software_id, _ihm_starting_comparative_models.script_file_id + Updated enumeration for _ihm_starting_model_details.starting_model_source + Updated _item.mandatory_code for _ihm_starting_comparative_models.starting_model_seq_id_begin + Updated _item.mandatory_code for _ihm_starting_comparative_models.starting_model_seq_id_end |
mmcif_ihm_ext.dic |
| 0.130 | 2018-04-19 | Changes (bv): + Updated enumeration for ihm_dataset_related_db_reference.db_name and ihm_dataset_list.data_type |
mmcif_ihm_ext.dic |
| 0.129 | 2018-03-22 | Changes (bv): + Added _ihm_modeling_post_process.struct_assembly_id and _ihm_modeling_post_process.dataset_group_id + Added ihm_residues_not_modeled |
mmcif_ihm_ext.dic |
| 0.128 | 2018-03-16 | Changes (bv): + Added _ihm_dataset_group.application and _ihm_dataset_group.details + Updated enumeration for _ihm_modeling_post_process.type + Fixed typos |
mmcif_ihm_ext.dic |
| 0.127 | 2018-02-26 | Changes (bv): + Added _ihm_poly_residue_feature.residue_range_granularity, _ihm_poly_residue_feature.rep_atom + Updated enumeration for _ihm_cross_link_list.linker_type, _ihm_external_files.content_type |
mmcif_ihm_ext.dic |
| 0.126 | 2018-02-06 | Changes (bv): + Updated enumeration list for _ihm_dataset_list.data_type |
mmcif_ihm_ext.dic |
| 0.125 | 2018-02-05 | Changes (bv): + Added _ihm_derived_distance_restraint.random_exclusion_fraction + Changed _ihm_derived_distance_restraint.conditionality to _ihm_derived_distance_restraint.group_conditionality + Updated description for _ihm_derived_distance_restraint.group_conditionality |
mmcif_ihm_ext.dic |
| 0.124 | 2018-02-01 | Changes (bv): + Updated parent-child relationships for _ihm_model_representation.entity_id, _ihm_struct_assembly.entity_id + Added IHM_FEATURE_LIST and IHM_NON_POLY_ATOM_FEATURE categories. + Changed IHM_FEATUTE_SELECTION_ATOM to IHM_POLY_ATOM_FEATURE. + Changed IHM_FEATUTE_SELECTION_RESDIUE to IHM_POLY_RESIDUE_FEATURE. + Updated IHM_DERIVED_DISTANCE_RESTRAINT |
mmcif_ihm_ext.dic |
| 0.123 | 2018-01-24 | Changes (bv): + Added IHM_STRUCT_ASSEMBLY_DETAILS category. + Updated parent-child relationships for _ihm_starting_model_details.entity_description, _ihm_model_representation.entity_description, _ihm_struct_assembly.entity_description, _ihm_predicted_contact_restraint.entity_description_1, _ihm_cross_link_list.entity_description_1, _ihm_predicted_contact_restraint.entity_description_2, _ihm_cross_link_list.entity_description_2 |
mmcif_ihm_ext.dic |
| 0.122 | 2018-01-22 | Changes (bv): + Updated parent-child relationships for _ihm_model_representation.entity_id, _ihm_struct_assembly.entity_id, _ihm_feature_selection_atom.entity_id, _ihm_feature_selection_residue.entity_id + Changed _ihm_derived_distance_restraint.distance_lower_limit_std to _ihm_derived_distance_restraint.distance_lower_limit_esd + Changed _ihm_derived_distance_restraint.distance_upper_limit_std to _ihm_derived_distance_restraint.distance_upper_limit_esd + Added enumeration for _ihm_external_reference_info.refers_to and _ihm_external_files.file_format |
mmcif_ihm_ext.dic |
| 0.121 | 2018-01-17 | Changes (bv): + Added _ihm_derived_distance_restraint.distance_upper_limit_std and _ihm_derived_distance_restraint.distance_lower_limit_std + Updated _item_type.code for _ihm_external_reference_info.reference_type and _ihm_external_reference_info.reference_provider |
mmcif_ihm_ext.dic |
| 0.120 | 2018-01-10 | Changes (bv): + Added ihm_feature_selection_atom, ihm_feature_selection_residue, ihm_derived_distance_restraint + Fixed typos in the parent name of _ihm_predicted_contact_restraint.atom_id_1 and _ihm_predicted_contact_restraint.atom_id_2 + Fixed _item_type.code in _ihm_starting_model_coord.atom_id |
mmcif_ihm_ext.dic |
| 0.119 | 2017-12-07 | Changes (bv): + Changed ihm_ordered_ensemble.ordered_process_id to ihm_ordered_ensemble.process_id + Changed ihm_ordered_ensemble.ordered_process_description to ihm_ordered_ensemble.process_description. + Changed parent-child relationships for _ihm_predicted_contact_restraint.atom_id_1, _ihm_predicted_contact_restraint.atom_id_2, _ihm_cross_link_restraint.atom_id_1, _ihm_cross_link_restraint.atom_id_2, _ihm_starting_model_coord.atom_id |
mmcif_ihm_ext.dic |
| 0.118 | 2017-12-06 | Changes (bv): + Changed ihm_time_ordered_ensemble to ihm_ordered_ensemble with appropriate revisions to the category + Changed _ihm_modeling_protocol.time_ordered_flag to _ihm_modeling_protocol.ordered_flag + Changed mandatory code for _ihm_model_list.representation_id + Added an example to ihm_model_list category |
mmcif_ihm_ext.dic |
| 0.117 | 2017-11-09 | Changes (bv): + Updated description for _ihm_starting_model_details.starting_model_sequence_offset |
mmcif_ihm_ext.dic |
| 0.116 | 2017-10-16 | Changes (bv): + Updated _item_description.description for _ihm_model_list.model_group_id + Updated enumerations for _ihm_dataset_list.data_type + Updated parent-child relationships within _ihm_model_list.model_id |
mmcif_ihm_ext.dic |
| 0.115 | 2017-10-12 | Changes (bv): + Added _ihm_modeling_post_process.feature_name + Fixed enumeration for _ihm_cross_link_list.linker_type |
mmcif_ihm_ext.dic |
| 0.114 | 2017-10-09 | Changes (bv): + Fixed typos and syntax |
mmcif_ihm_ext.dic |
| 0.113 | 2017-10-06 | Changes (bv): + Added IHM_MODEL_REPRESENTATIVE + Added enumeration to _ihm_cross_link_list.linker_type + Updated item description for _ihm_predicted_contact_restraint.probability |
mmcif_ihm_ext.dic |
| 0.112 | 2017-10-04 | Changes (bv): + Added _ihm_dataset_list.details + Added enumeration to _ihm_dataset_list.data_type |
mmcif_ihm_ext.dic |
| 0.111 | 2017-10-04 | Changes (bv): + Removed _ihm_cross_link_restraint.linker_type + Updated enumerations to _ihm_cross_link_restraint.restraint_type |
mmcif_ihm_ext.dic |
| 0.110 | 2017-10-03 | Changes (bv): + Added _ihm_cross_link_restraint.atom_id_1, _ihm_cross_link_restraint.atom_id_2 + Added _ihm_cross_link_restraint.restraint_type + Changed _ihm_cross_link_restraint.type to _ihm_cross_link_restraint.linker_type + Changed _ihm_cross_link_list.type to _ihm_cross_link_list.linker_type + Added enumerations to _ihm_cross_link_restraint.linker_type and _ihm_cross_link_list.linker_type + Added enumeration to and changed _item.mandatory_code of _ihm_cross_link_restraint.model_granularity + Added ihm_predicted_contact_restraint category + Added enumeration to _ihm_dataset_list.data_type |
mmcif_ihm_ext.dic |
| 0.109 | 2017-09-28 | Changes (bv): + Added _ihm_model_list.representation_id + Added _atom_site.ihm_model_id |
mmcif_ihm_ext.dic |
| 0.108 | 2017-09-12 | Changes (bv): + Added IHM_STRUCT_ASSEMBLY_CLASS, IHM_STRUCT_ASSEMBLY_CLASS_LIST + Added _ihm_struct_assembly.parent_assembly_id |
mmcif_ihm_ext.dic |
| 0.107 | 2017-07-17 | Changes (ep/bv): + Added category_group_list, item_type_list and item_units_list categories |
mmcif_ihm_ext.dic |
| 0.106 | 2017-07-13 | Changes (bv): + Updated dictionary description and version history |
mmcif_ihm_ext.dic |
| 0.105 | 2017-05-25 | Changes (bv): + Added item description to _ihm_ensemble_info.ensemble_file_id + Added item description to _ihm_2dem_class_average_restraint.pixel_size_width + Added item description to _ihm_2dem_class_average_restraint.pixel_size_height + Added category description to ihm_2dem_class_average_fitting + Added enumeration 'DCD' to _ihm_external_files.file_format + Changed _ihm_external_files.file_size_kb to _ihm_external_files.file_size_bytes |
mmcif_ihm_ext.dic |
| 0.104 | 2017-04-19 | Changes (bv): + Updated IHM_STARTING_MODEL_DETAILS + Updated IHM_STARTING_COMPARATIVE_MODELS + Updated IHM_STARTING_MODEL_SEQ_DIF + Updated IHM_MODEL_REPRESENTATION + Updated IHM_DATASET_LIST + Added IHM_DATASET_GROUP + Updated IHM_MODELING_PROTOCOL |
mmcif_ihm_ext.dic |
| 0.103 | 2017-03-30 | Changes (bv): + Updated IHM_STARTING_MODEL_DETAILS + Updated IHM_STARTING_COMPARATIVE_MODELS + Updated IHM_DATASET_LIST, IHM_RELATED_DATASETS + Updated IHM_DATASET_RELATED_DB_REFERENCE + Updated IHM_DATASET_EXTERNAL_REFERENCE + Added examples to IHM_EXTERNAL_REFERENCE_INFO and IHM_EXTERNAL_FILES |
mmcif_ihm_ext.dic |
| 0.102 | 2017-03-29 | Changes (bv): + Updated examples in IHM_STARTING_COMPARATIVE_MODELS |
mmcif_ihm_ext.dic |
| 0.101 | 2017-03-29 | Changes (bv): + Updated _ihm_starting_model_seq_dif.db_entity_id as non-mandatory |
mmcif_ihm_ext.dic |
| 0.100 | 2017-03-23 | Changes (bv): + Release as provisional version 0.100 + Added _ihm_external_files.content_type + Added _ihm_external_files.details + Removed IHM_MODELING_WORKFLOW_FILES |
mmcif_ihm_ext.dic |
| 0.000 | 2017-03-20 | Changes (jdw/bv) + Release as initial version 0.000 + Changed _imp to _ihm + Changed _imp_template_details to _ihm_starting_model_details + Changed _imp_tempate_model_coord to _ihm_starting_model_coord + Changed _imp_pseudo_atom_site to _ihm_sphere_object_site + Added enumeration 'integrative' to _ihm_starting_model_details.starting_model_source + Separated ihm_cross_link_restraint and ihm_cross_link_list categories + Updated ambiguous crosslinks in ihm_cross_link_restraint and ihm_cross_link_list categories + Added ihm_dataset_list, ihm_related_database_reference and ihm_dataset_other categories + Added ihm_cross_link_result (yet to be completed) and ihm_entity_assembly categories + Updated ihm_2dem_class_average_restraint category + Removed ihm_cross_link_db_reference, ihm_cross_link_reference_auxiliary, ihm_2dem_class_average categories + Revised several data items to be non-mandatory + Changed category key item in ihm_model_details category to account for multiple coarse-grained representations of the same model segment (introduced _ihm_model_details.ordinal_id) + Updated _ihm_sphere_obj_site.entity_instance_id, ihm_cross_link_restraint (psi and sigma parameters) + Added ihm_modeling_protocol, ihm_cluster_info, ihm_struct_assembly (previously ihm_entity_assembly) + Added _ihm_3dem_restraint category; minor changes to other categories + Changed ihm_model_details category name to ihm_model_representation (handles multi-scale representation) + Changed several data items in the ihm_modeling_protocol category + Added ihm_modeling_post_process, ihm_model_list, ihm_multi_state_modeling, ihm_time_ordered_ensemble, ihm_gaussian_object_site categories + Linked ihm_model_list to ihm_sphere_obj_site through model_id + Linked ihm_starting_model_details to ihm_dataset_list through dataset_list_id + Added new data item _ihm_model_representation.representation_id and more changes to ihm_modeling_protocol and ihm_gaussian_obj_site categories. + Added ihm_gaussian_obj_ensemble category to represent ensembles as gaussian objects - to be different from + ihm_gaussian_object_site category that is used in model representation and hence by visualization software. + Changed ihm_cluster_info category name to ihm_ensemble_info and changed relevant data item names accordingly. + Changed ihm_related_database_reference category name to ihm_dataset_related_db_reference to be consistent with other similar categories + Minor changes in other categories: ihm_model_list, ihm_dataset_list, ihm_modeling_protocol, ihm_ensemble_info, ihm_multi_state_modeling, ihm_time_ordered_ensemble, ihm_2dem_class_average_restraint (data items are now similar to 2D class average images in EMPIAR), ihm_model_represenation. + Updated parent-child relationships across several categories (ihm_modeling_protocol, ihm_ensemble_info ihm_model_list, ihm_multi_state_modeling, ihm_time_ordered_ensemble, ihm_2dem_class_average_fitting, ihm_cross_link_result) + Updated examples in ihm_dataset_list, ihm_dataset_other and ihm_dataset_related_db_reference + Changed ihm_modeling_experiment to ihm_modeling_protocol to be consistent with the model archive naming convention + Added ihm_sas_restraint category; added _ihm_3dem_restraint.map_segment_flag + Modified the following categories: ihm_model_list, ihm_modeling_protocol, ihm_multi_state_modeling, ihm_time_ordered_ensemble + Minor updates to ihm_cross_link_list, ihm_cross_link_restraint and ihm_model_representation categories. + Added _ihm_sphere_obj_site.rmsf and _ihm_starting_model_details.asym_id + Added ihm_related_datasets and ihm_cross_link_result_parameters + Added _ihm_3dem_restraint.struct_assembly_id, _ihm_sas_restraint.struct_assembly_id, _ihm_starting_model_details.notes and _ihm_starting_model_coord.group_PDB + Changed _ihm_3dem_restraint.id to _ihm_3dem_restraint.ordinal_id and _ihm_sas_restraint.id to _ihm_sas_restraint.ordinal_id + Changed _ihm_dataset_related_db_reference.access_code to _ihm_dataset_related_db_reference.accession_code + Added new categories to reference externally hosted files: IHM_LOCALIZATION_DENSITY_FILES, + IHM_STARTING_MODEL_ALIGNMENT_FILES, IHM_MODELING_WORKFLOW_FILES + Added IHM_DATA_DOI_URL_INFO category to include a URL corresponding to a DOI. This enables automated download of files. + Removed redundant DOI references from several categories + Added _ihm_starting_model_details.starting_model_sequence_offset + Changed _ihm_starting_model_details.starting_model_db_pdb_auth_asym_id to _ihm_starting_model_details.starting_model_auth_asym_id + Changed IHM_DOI_URL_INFO to IHM_EXTERNAL_REFERENCE_INFO; modified all downstream dependencies + Changed IHM_DATASET_OTHER to IHM_DATASET_EXTERNAL_REFERENCE_DETAILS; modified all downstream dependencies + Modified definitions within IHM_EXTERNAL_REFERENCE_INFO + Added IHM_EXTERNAL_FILES category; Removed IHM_STARTING_MODEL_ALIGNMENT_FILES category + Changed IHM_MODELING_WORKFLOW_FILES, IHM_LOCALIZATION_DENSITY_FILES + Changed IHM_DATASET_EXTERNAL_REFERENCE_DETAILS to IHM_DATASET_EXTERNAL_REFERENCE + Modified IHM_STARTING_MODEL_DETAILS category + Added IHM_STARTING_COMPARATIVE_MODELS category + Added IHM_STARTING_MODEL_SEQ_DIF category; removed _ihm_starting_model_details.notes + Updated IHM_ENSEMBLE_INFO, IHM_EXTERNAL_FILES and IHM_EXTERNAL_REFERENCE_INFO + Added _ihm_multi_state_modeling.experiment_type; updated IHM_ENSEMBLE_INFO |
mmcif_ihm_ext.dic |
| 1.26 | 2024-07-11 | + Add "Crosslinking-MS" to the enumeration list of _ihm_dataset_list.data_type + Add "modeling" to the enumeration list of _ihm_dataset_group.application + Update category descriptions of ihm_model_list, ihm_model_group, ihm_model_group_link, ihm_model_representative + Add category "ihm_ordered_model" and deprecate category "ihm_ordered_ensemble" + Update enumerations for _ihm_cross_link_list.linker_type + Update _item_type.code for _ihm_dataset_related_db_reference.accession_code and _ihm_ensemble_info.ensemble_clustering_method + Add "ProteomeXchange" to the enumeration list of _ihm_dataset_related_db_reference.db_name |
mmcif_ihm_ext.dic |
| 1.25 | 2023-12-22 | + Rename dictionary + Reorganize repository |
mmcif_ihm_ext.dic |
| 1.24 | 2023-11-30 | Changes (bv): + Added ihm_multi_state_scheme, ihm_multi_state_scheme_connectivity + Added ihm_kinetic_rate, ihm_relaxation_time, ihm_relaxation_time_multi_state_scheme |
mmcif_ihm_ext.dic |
| 1.23 | 2023-07-05 | Changes (bv): + Added enumerations to _ihm_cross_link_list.linker_type |
mmcif_ihm_ext.dic |
| 1.22 | 2023-05-26 | Changes (bv): + Added enumerations to _ihm_dataset_related_db_reference.db_name |
mmcif_ihm_ext.dic |
| 1.21 | 2023-03-24 | Changes (bv): + Added enumerations to _ihm_cross_link_list.linker_type |
mmcif_ihm_ext.dic |
| 1.20 | 2023-02-19 | Changes (bv): + Updated category keys for ihm_entry_collection_mapping + Added enumerations to _ihm_cross_link_list.linker_type and _ihm_dataset_related_db_reference.db_name + Add nanoseconds to item_units_list |
mmcif_ihm_ext.dic |
| 1.19 | 2023-02-02 | Changes (bv): + Added enumerations to _ihm_cross_link_list.linker_type and _ihm_dataset_related_db_reference.db_name |
mmcif_ihm_ext.dic |
| 1.18 | 2022-12-20 | Changes (bv): + Added _ihm_ensemble_info.model_group_superimposed_flag + Added enumerations to _ihm_dataset_list.data_type and _ihm_ensemble_info.ensemble_clustering_method + Added ihm_entry_collection and ihm_entry_collection_mapping |
mmcif_ihm_ext.dic |
| 1.17 | 2021-05-21 | Changes (bv): + Added enumerations to _ihm_cross_link_list.linker_type |
mmcif_ihm_ext.dic |
| 1.16 | 2021-04-14 | Changes (bv): + Added enumerations to _ihm_cross_link_list.linker_type |
mmcif_ihm_ext.dic |
| 1.15 | 2021-03-16 | Changes (bv): + Added enumerations to _ihm_dataset_related_db_reference.db_name |
mmcif_ihm_ext.dic |
| 1.14 | 2021-03-04 | Changes (bv): + Added enumerations to _ihm_cross_link_list.linker_type |
mmcif_ihm_ext.dic |
| 1.13 | 2021-01-28 | Changes (bv): + Added enumerations to _ihm_cross_link_list.linker_type |
mmcif_ihm_ext.dic |
| 1.12 | 2020-07-10 | Changes (bv): + Added enumerations to _ihm_cross_link_list.linker_type |
mmcif_ihm_ext.dic |
| 1.11 | 2020-07-03 | Changes (bv): + Added ihm_hdx_restraint |
mmcif_ihm_ext.dic |
| 1.10 | 2020-06-04 | Changes (bv): + Added ihm_derived_angle_restraint, ihm_derived_dihedral_restraint + Added _ihm_derived_distance_restraint.distance_threshold_mean + Added _ihm_derived_distance_restraint.distance_threshold_esd + Updated enumeration for _ihm_derived_distance_restraint.restraint_type + Updated enumeration for _ihm_dataset_list.data_type |
mmcif_ihm_ext.dic |
| 1.09 | 2020-03-19 | Changes (bv): + Added ihm_data_transformation + Added _ihm_related_datasets.transformation_id |
mmcif_ihm_ext.dic |
| 1.08 | 2020-02-14 | Changes (bv): + Added _ihm_ensemble_info.sub_sample_flag, _ihm_ensemble_info.sub_sampling_type + Added ihm_ensemble_sub_sample |
mmcif_ihm_ext.dic |
| 1.07 | 2020-02-10 | Changes (bv): + Added CYS to _ihm_cross_link_list.linker_type enumeration list |
mmcif_ihm_ext.dic |
| 1.06 | 2020-01-24 | Changes (bv): + Added _ihm_cross_link_restraint.pseudo_site_flag + Added ihm_cross_link_pseudo_site category + Added ihm_pseudo_site category + Removed _ihm_pseudo_site_feature.Cartn_x, _ihm_pseudo_site_feature.Cartn_y _ihm_pseudo_site_feature.Cartn_z, _ihm_pseudo_site_feature.radius _ihm_pseudo_site_feature.description + Added _ihm_pseudo_site_feature.pseudo_site_id |
mmcif_ihm_ext.dic |
| 1.05 | 2019-11-15 | Changes (bv): + Added BMSO and DHSO to _ihm_cross_link_list.linker_type enumeration list |
mmcif_ihm_ext.dic |
| 1.04 | 2019-10-10 | Changes (bv): + Added _ihm_derived_distance_restraint.mic_value + Added enumeration to _ihm_dataset_list.data_type |
mmcif_ihm_ext.dic |
| 1.03 | 2019-10-03 | Changes (bv): + Changed _ihm_geometric_object_distance_restraint.other_details to _ihm_geometric_object_distance_restraint.details + Removed _ihm_geometric_object_list.other_details and _ihm_geometric_object_half_torus.details |
mmcif_ihm_ext.dic |
| 1.02 | 2019-10-01 | Changes (bv): + Added _ihm_starting_model_details.description, _ihm_starting_comparative_models.details + Added _ihm_model_representation_details.description, _ihm_modeling_protocol_details.description + Added _ihm_modeling_post_process.details, _ihm_ensemble_info.details + Added _ihm_external_reference_info.details, _ihm_cross_link_list.details + Added _ihm_feature_list.details, _ihm_geometric_object_half_torus.details + Added enumerations (DSG and BSP) to _ihm_cross_link_list.linker_type + Updated _item_enumeration.detail for items in _ihm_cross_link_list.linker_type + Updated _item_description.description for _ihm_external_files.details |
mmcif_ihm_ext.dic |
| 1.01 | 2019-07-26 | Changes (bv): + Updated _item_mandatory.code and _pdbx_item.mandatory_code for several data items. + Added _item_sub_category.id in ihm_poly_probe_position. + Added PDB-Dev to the enumeration list in ihm_dataset_related_db_reference.db_name. |
mmcif_ihm_ext.dic |
| 1.0 | 2019-05-31 | Changes (bv): + Updated several categories to fix primary key information and parent-child relationships |
mmcif_ihm_ext.dic |
| 0.141 | 2019-05-06 | Changes (bv): + Added IHM_CHEMICAL_COMPONENT_DESCRIPTOR, IHM_PROBE_LIST, IHM_EPR_RESTRAINT + Added IHM_POLY_PROBE_POSITION, IHM_POLY_PROBE_CONJUGATE + Added IHM_LIGAND_PROBE + Added _ihm_cross_link_list.linker_chem_comp_descriptor_id |
mmcif_ihm_ext.dic |
| 0.140 | 2019-03-11 | Changes (bv): + Added IHM_INTERFACE_RESIDUE_FEATURE + Added _ihm_poly_residue_feature.interface_residue_flag + Updated item_mandatory.code for _ihm_poly_residue_feature.asym_id _ihm_poly_atom_feature.asym_id, _ihm_non_poly_feature.asym_id |
mmcif_ihm_ext.dic |
| 0.139 | 2019-01-03 | Changes (bv): + Changed IHM_FEATURE_PSEUDO_SITE to IHM_PSEUDO_SITE_FEATURE |
mmcif_ihm_ext.dic |
| 0.138 | 2018-12-20 | Changes (bv): + Added _ihm_modeling_protocol.ensemble_flag + Changed _item.type_code from code to ucode for: _ihm_modeling_protocol.multi_scale_flag _ihm_modeling_protocol.multi_state_flag _ihm_modeling_protocol.ordered_flag _ihm_dataset_list.database_hosted _ihm_2dem_class_average_restraint.image_segment_flag _ihm_3dem_restraint.map_segment_flag _ihm_sas_restraint.profile_segment_flag + Updated definitions for _ihm_feature_list.entity_type + Updated enumeration list for _ihm_feature_list.feature_type |
mmcif_ihm_ext.dic |
| 0.137 | 2018-10-26 | Changes (bv): + Renamed IHM_NON_POLY_ATOM_FEATURE to IHM_NON_POLY_FEATURE + Updated _ihm_feature_list.feature_type + Added IHM_FEATURE_PSEUDO_SITE |
mmcif_ihm_ext.dic |
| 0.136 | 2018-10-05 | Changes (bv): + Added ihm_hydroxyl_radical_fp_restraint |
mmcif_ihm_ext.dic |
| 0.135 | 2018-10-04 | Changes (bv): + Added DSSO crosslinker + Updated parent-child relationships for several data items: _ihm_starting_model_details.entity_id, _ihm_model_representation.entity_id, _ihm_struct_assembly.entity_id, _ihm_localization_density_files.entity_id, _ihm_starting_model_coord.entity_id, _ihm_starting_model_coord.comp_id, _ihm_sphere_obj_site.entity_id, _ihm_gaussian_obj_site.entity_id, _ihm_gaussian_obj_ensemble.entity_id + Updated _item_type.code for _ihm_external_files.file_path |
mmcif_ihm_ext.dic |
| 0.134 | 2018-07-18 | Changes (bv): + Updated _item_sub_category.id for matrices and vectors |
mmcif_ihm_ext.dic |
| 0.133 | 2018-06-29 | Changes (bv): + Added IHM_GEOMETRIC_OBJECT_LIST, IHM_GEOMETRIC_OBJECT_CENTER, IHM_GEOMETRIC_OBJECT_TRANSFORMATION + Added IHM_GEOMETRIC_OBJECT_SPHERE, IHM_GEOMETRIC_OBJECT_TORUS, IHM_GEOMETRIC_OBJECT_HALF_TORUS + Added IHM_GEOMETRIC_OBJECT_AXIS, IHM_GEOMETRIC_OBJECT_PLANE, IHM_GEOMETRIC_OBJECT_DISTANCE_RESTRAINT |
mmcif_ihm_ext.dic |
| 0.132 | 2018-05-25 | Changes (bv): + Added IHM_STARTING_COMPUTATIONAL_MODELS + Removed _ihm_starting_comparative_models.software_id, _ihm_starting_comparative_models.script_file_id + Added _ihm_modeling_post_process.script_file_id, _ihm_modeling_protocol.script_file_id |
mmcif_ihm_ext.dic |
| 0.131 | 2018-05-21 | Changes (bv): + Added _ihm_modeling_post_process.software_id, _ihm_modeling_protocol.software_id + Added _ihm_multi_state_modeling.population_fraction_sd + Added _ihm_starting_comparative_models.software_id, _ihm_starting_comparative_models.script_file_id + Updated enumeration for _ihm_starting_model_details.starting_model_source + Updated _item.mandatory_code for _ihm_starting_comparative_models.starting_model_seq_id_begin + Updated _item.mandatory_code for _ihm_starting_comparative_models.starting_model_seq_id_end |
mmcif_ihm_ext.dic |
| 0.130 | 2018-04-19 | Changes (bv): + Updated enumeration for ihm_dataset_related_db_reference.db_name and ihm_dataset_list.data_type |
mmcif_ihm_ext.dic |
| 0.129 | 2018-03-22 | Changes (bv): + Added _ihm_modeling_post_process.struct_assembly_id and _ihm_modeling_post_process.dataset_group_id + Added ihm_residues_not_modeled |
mmcif_ihm_ext.dic |
| 0.128 | 2018-03-16 | Changes (bv): + Added _ihm_dataset_group.application and _ihm_dataset_group.details + Updated enumeration for _ihm_modeling_post_process.type + Fixed typos |
mmcif_ihm_ext.dic |
| 0.127 | 2018-02-26 | Changes (bv): + Added _ihm_poly_residue_feature.residue_range_granularity, _ihm_poly_residue_feature.rep_atom + Updated enumeration for _ihm_cross_link_list.linker_type, _ihm_external_files.content_type |
mmcif_ihm_ext.dic |
| 0.126 | 2018-02-06 | Changes (bv): + Updated enumeration list for _ihm_dataset_list.data_type |
mmcif_ihm_ext.dic |
| 0.125 | 2018-02-05 | Changes (bv): + Added _ihm_derived_distance_restraint.random_exclusion_fraction + Changed _ihm_derived_distance_restraint.conditionality to _ihm_derived_distance_restraint.group_conditionality + Updated description for _ihm_derived_distance_restraint.group_conditionality |
mmcif_ihm_ext.dic |
| 0.124 | 2018-02-01 | Changes (bv): + Updated parent-child relationships for _ihm_model_representation.entity_id, _ihm_struct_assembly.entity_id + Added IHM_FEATURE_LIST and IHM_NON_POLY_ATOM_FEATURE categories. + Changed IHM_FEATUTE_SELECTION_ATOM to IHM_POLY_ATOM_FEATURE. + Changed IHM_FEATUTE_SELECTION_RESDIUE to IHM_POLY_RESIDUE_FEATURE. + Updated IHM_DERIVED_DISTANCE_RESTRAINT |
mmcif_ihm_ext.dic |
| 0.123 | 2018-01-24 | Changes (bv): + Added IHM_STRUCT_ASSEMBLY_DETAILS category. + Updated parent-child relationships for _ihm_starting_model_details.entity_description, _ihm_model_representation.entity_description, _ihm_struct_assembly.entity_description, _ihm_predicted_contact_restraint.entity_description_1, _ihm_cross_link_list.entity_description_1, _ihm_predicted_contact_restraint.entity_description_2, _ihm_cross_link_list.entity_description_2 |
mmcif_ihm_ext.dic |
| 0.122 | 2018-01-22 | Changes (bv): + Updated parent-child relationships for _ihm_model_representation.entity_id, _ihm_struct_assembly.entity_id, _ihm_feature_selection_atom.entity_id, _ihm_feature_selection_residue.entity_id + Changed _ihm_derived_distance_restraint.distance_lower_limit_std to _ihm_derived_distance_restraint.distance_lower_limit_esd + Changed _ihm_derived_distance_restraint.distance_upper_limit_std to _ihm_derived_distance_restraint.distance_upper_limit_esd + Added enumeration for _ihm_external_reference_info.refers_to and _ihm_external_files.file_format |
mmcif_ihm_ext.dic |
| 0.121 | 2018-01-17 | Changes (bv): + Added _ihm_derived_distance_restraint.distance_upper_limit_std and _ihm_derived_distance_restraint.distance_lower_limit_std + Updated _item_type.code for _ihm_external_reference_info.reference_type and _ihm_external_reference_info.reference_provider |
mmcif_ihm_ext.dic |
| 0.120 | 2018-01-10 | Changes (bv): + Added ihm_feature_selection_atom, ihm_feature_selection_residue, ihm_derived_distance_restraint + Fixed typos in the parent name of _ihm_predicted_contact_restraint.atom_id_1 and _ihm_predicted_contact_restraint.atom_id_2 + Fixed _item_type.code in _ihm_starting_model_coord.atom_id |
mmcif_ihm_ext.dic |
| 0.119 | 2017-12-07 | Changes (bv): + Changed ihm_ordered_ensemble.ordered_process_id to ihm_ordered_ensemble.process_id + Changed ihm_ordered_ensemble.ordered_process_description to ihm_ordered_ensemble.process_description. + Changed parent-child relationships for _ihm_predicted_contact_restraint.atom_id_1, _ihm_predicted_contact_restraint.atom_id_2, _ihm_cross_link_restraint.atom_id_1, _ihm_cross_link_restraint.atom_id_2, _ihm_starting_model_coord.atom_id |
mmcif_ihm_ext.dic |
| 0.118 | 2017-12-06 | Changes (bv): + Changed ihm_time_ordered_ensemble to ihm_ordered_ensemble with appropriate revisions to the category + Changed _ihm_modeling_protocol.time_ordered_flag to _ihm_modeling_protocol.ordered_flag + Changed mandatory code for _ihm_model_list.representation_id + Added an example to ihm_model_list category |
mmcif_ihm_ext.dic |
| 0.117 | 2017-11-09 | Changes (bv): + Updated description for _ihm_starting_model_details.starting_model_sequence_offset |
mmcif_ihm_ext.dic |
| 0.116 | 2017-10-16 | Changes (bv): + Updated _item_description.description for _ihm_model_list.model_group_id + Updated enumerations for _ihm_dataset_list.data_type + Updated parent-child relationships within _ihm_model_list.model_id |
mmcif_ihm_ext.dic |
| 0.115 | 2017-10-12 | Changes (bv): + Added _ihm_modeling_post_process.feature_name + Fixed enumeration for _ihm_cross_link_list.linker_type |
mmcif_ihm_ext.dic |
| 0.114 | 2017-10-09 | Changes (bv): + Fixed typos and syntax |
mmcif_ihm_ext.dic |
| 0.113 | 2017-10-06 | Changes (bv): + Added IHM_MODEL_REPRESENTATIVE + Added enumeration to _ihm_cross_link_list.linker_type + Updated item description for _ihm_predicted_contact_restraint.probability |
mmcif_ihm_ext.dic |
| 0.112 | 2017-10-04 | Changes (bv): + Added _ihm_dataset_list.details + Added enumeration to _ihm_dataset_list.data_type |
mmcif_ihm_ext.dic |
| 0.111 | 2017-10-04 | Changes (bv): + Removed _ihm_cross_link_restraint.linker_type + Updated enumerations to _ihm_cross_link_restraint.restraint_type |
mmcif_ihm_ext.dic |
| 0.110 | 2017-10-03 | Changes (bv): + Added _ihm_cross_link_restraint.atom_id_1, _ihm_cross_link_restraint.atom_id_2 + Added _ihm_cross_link_restraint.restraint_type + Changed _ihm_cross_link_restraint.type to _ihm_cross_link_restraint.linker_type + Changed _ihm_cross_link_list.type to _ihm_cross_link_list.linker_type + Added enumerations to _ihm_cross_link_restraint.linker_type and _ihm_cross_link_list.linker_type + Added enumeration to and changed _item.mandatory_code of _ihm_cross_link_restraint.model_granularity + Added ihm_predicted_contact_restraint category + Added enumeration to _ihm_dataset_list.data_type |
mmcif_ihm_ext.dic |
| 0.109 | 2017-09-28 | Changes (bv): + Added _ihm_model_list.representation_id + Added _atom_site.ihm_model_id |
mmcif_ihm_ext.dic |
| 0.108 | 2017-09-12 | Changes (bv): + Added IHM_STRUCT_ASSEMBLY_CLASS, IHM_STRUCT_ASSEMBLY_CLASS_LIST + Added _ihm_struct_assembly.parent_assembly_id |
mmcif_ihm_ext.dic |
| 0.107 | 2017-07-17 | Changes (ep/bv): + Added category_group_list, item_type_list and item_units_list categories |
mmcif_ihm_ext.dic |
| 0.106 | 2017-07-13 | Changes (bv): + Updated dictionary description and version history |
mmcif_ihm_ext.dic |
| 0.105 | 2017-05-25 | Changes (bv): + Added item description to _ihm_ensemble_info.ensemble_file_id + Added item description to _ihm_2dem_class_average_restraint.pixel_size_width + Added item description to _ihm_2dem_class_average_restraint.pixel_size_height + Added category description to ihm_2dem_class_average_fitting + Added enumeration 'DCD' to _ihm_external_files.file_format + Changed _ihm_external_files.file_size_kb to _ihm_external_files.file_size_bytes |
mmcif_ihm_ext.dic |
| 0.104 | 2017-04-19 | Changes (bv): + Updated IHM_STARTING_MODEL_DETAILS + Updated IHM_STARTING_COMPARATIVE_MODELS + Updated IHM_STARTING_MODEL_SEQ_DIF + Updated IHM_MODEL_REPRESENTATION + Updated IHM_DATASET_LIST + Added IHM_DATASET_GROUP + Updated IHM_MODELING_PROTOCOL |
mmcif_ihm_ext.dic |
| 0.103 | 2017-03-30 | Changes (bv): + Updated IHM_STARTING_MODEL_DETAILS + Updated IHM_STARTING_COMPARATIVE_MODELS + Updated IHM_DATASET_LIST, IHM_RELATED_DATASETS + Updated IHM_DATASET_RELATED_DB_REFERENCE + Updated IHM_DATASET_EXTERNAL_REFERENCE + Added examples to IHM_EXTERNAL_REFERENCE_INFO and IHM_EXTERNAL_FILES |
mmcif_ihm_ext.dic |
| 0.102 | 2017-03-29 | Changes (bv): + Updated examples in IHM_STARTING_COMPARATIVE_MODELS |
mmcif_ihm_ext.dic |
| 0.101 | 2017-03-29 | Changes (bv): + Updated _ihm_starting_model_seq_dif.db_entity_id as non-mandatory |
mmcif_ihm_ext.dic |
| 0.100 | 2017-03-23 | Changes (bv): + Release as provisional version 0.100 + Added _ihm_external_files.content_type + Added _ihm_external_files.details + Removed IHM_MODELING_WORKFLOW_FILES |
mmcif_ihm_ext.dic |
| 0.000 | 2017-03-20 | Changes (jdw/bv) + Release as initial version 0.000 + Changed _imp to _ihm + Changed _imp_template_details to _ihm_starting_model_details + Changed _imp_tempate_model_coord to _ihm_starting_model_coord + Changed _imp_pseudo_atom_site to _ihm_sphere_object_site + Added enumeration 'integrative' to _ihm_starting_model_details.starting_model_source + Separated ihm_cross_link_restraint and ihm_cross_link_list categories + Updated ambiguous crosslinks in ihm_cross_link_restraint and ihm_cross_link_list categories + Added ihm_dataset_list, ihm_related_database_reference and ihm_dataset_other categories + Added ihm_cross_link_result (yet to be completed) and ihm_entity_assembly categories + Updated ihm_2dem_class_average_restraint category + Removed ihm_cross_link_db_reference, ihm_cross_link_reference_auxiliary, ihm_2dem_class_average categories + Revised several data items to be non-mandatory + Changed category key item in ihm_model_details category to account for multiple coarse-grained representations of the same model segment (introduced _ihm_model_details.ordinal_id) + Updated _ihm_sphere_obj_site.entity_instance_id, ihm_cross_link_restraint (psi and sigma parameters) + Added ihm_modeling_protocol, ihm_cluster_info, ihm_struct_assembly (previously ihm_entity_assembly) + Added _ihm_3dem_restraint category; minor changes to other categories + Changed ihm_model_details category name to ihm_model_representation (handles multi-scale representation) + Changed several data items in the ihm_modeling_protocol category + Added ihm_modeling_post_process, ihm_model_list, ihm_multi_state_modeling, ihm_time_ordered_ensemble, ihm_gaussian_object_site categories + Linked ihm_model_list to ihm_sphere_obj_site through model_id + Linked ihm_starting_model_details to ihm_dataset_list through dataset_list_id + Added new data item _ihm_model_representation.representation_id and more changes to ihm_modeling_protocol and ihm_gaussian_obj_site categories. + Added ihm_gaussian_obj_ensemble category to represent ensembles as gaussian objects - to be different from + ihm_gaussian_object_site category that is used in model representation and hence by visualization software. + Changed ihm_cluster_info category name to ihm_ensemble_info and changed relevant data item names accordingly. + Changed ihm_related_database_reference category name to ihm_dataset_related_db_reference to be consistent with other similar categories + Minor changes in other categories: ihm_model_list, ihm_dataset_list, ihm_modeling_protocol, ihm_ensemble_info, ihm_multi_state_modeling, ihm_time_ordered_ensemble, ihm_2dem_class_average_restraint (data items are now similar to 2D class average images in EMPIAR), ihm_model_represenation. + Updated parent-child relationships across several categories (ihm_modeling_protocol, ihm_ensemble_info ihm_model_list, ihm_multi_state_modeling, ihm_time_ordered_ensemble, ihm_2dem_class_average_fitting, ihm_cross_link_result) + Updated examples in ihm_dataset_list, ihm_dataset_other and ihm_dataset_related_db_reference + Changed ihm_modeling_experiment to ihm_modeling_protocol to be consistent with the model archive naming convention + Added ihm_sas_restraint category; added _ihm_3dem_restraint.map_segment_flag + Modified the following categories: ihm_model_list, ihm_modeling_protocol, ihm_multi_state_modeling, ihm_time_ordered_ensemble + Minor updates to ihm_cross_link_list, ihm_cross_link_restraint and ihm_model_representation categories. + Added _ihm_sphere_obj_site.rmsf and _ihm_starting_model_details.asym_id + Added ihm_related_datasets and ihm_cross_link_result_parameters + Added _ihm_3dem_restraint.struct_assembly_id, _ihm_sas_restraint.struct_assembly_id, _ihm_starting_model_details.notes and _ihm_starting_model_coord.group_PDB + Changed _ihm_3dem_restraint.id to _ihm_3dem_restraint.ordinal_id and _ihm_sas_restraint.id to _ihm_sas_restraint.ordinal_id + Changed _ihm_dataset_related_db_reference.access_code to _ihm_dataset_related_db_reference.accession_code + Added new categories to reference externally hosted files: IHM_LOCALIZATION_DENSITY_FILES, + IHM_STARTING_MODEL_ALIGNMENT_FILES, IHM_MODELING_WORKFLOW_FILES + Added IHM_DATA_DOI_URL_INFO category to include a URL corresponding to a DOI. This enables automated download of files. + Removed redundant DOI references from several categories + Added _ihm_starting_model_details.starting_model_sequence_offset + Changed _ihm_starting_model_details.starting_model_db_pdb_auth_asym_id to _ihm_starting_model_details.starting_model_auth_asym_id + Changed IHM_DOI_URL_INFO to IHM_EXTERNAL_REFERENCE_INFO; modified all downstream dependencies + Changed IHM_DATASET_OTHER to IHM_DATASET_EXTERNAL_REFERENCE_DETAILS; modified all downstream dependencies + Modified definitions within IHM_EXTERNAL_REFERENCE_INFO + Added IHM_EXTERNAL_FILES category; Removed IHM_STARTING_MODEL_ALIGNMENT_FILES category + Changed IHM_MODELING_WORKFLOW_FILES, IHM_LOCALIZATION_DENSITY_FILES + Changed IHM_DATASET_EXTERNAL_REFERENCE_DETAILS to IHM_DATASET_EXTERNAL_REFERENCE + Modified IHM_STARTING_MODEL_DETAILS category + Added IHM_STARTING_COMPARATIVE_MODELS category + Added IHM_STARTING_MODEL_SEQ_DIF category; removed _ihm_starting_model_details.notes + Updated IHM_ENSEMBLE_INFO, IHM_EXTERNAL_FILES and IHM_EXTERNAL_REFERENCE_INFO + Added _ihm_multi_state_modeling.experiment_type; updated IHM_ENSEMBLE_INFO |
mmcif_ihm_ext.dic |
Data Type List
| Data Type Code | Primitive Type Code | Regular Expression | Description |
|---|---|---|---|
| 3x4_matrices | char | (((([ \t]*-?(([0-9]+)[.]?|([0-9]*[.][0-9]+))([(][0-9]+[)])?([eE][+-]?[0-9]+)? +){3})?(-?(([0-9]+)[.]?|([0-9]*[.][0-9]+))([(][0-9]+[)])?([eE][+-]?[0-9]+)? *\n([\t ]*\n)*)){3})*((([ \t]*-?(([0-9]+)[.]?|([0-9]*[.][0-9]+))([(][0-9]+[)])?([eE][+-]?[0-9]+)? +){3})?(-?(([0-9]+)[.]?|([0-9]*[.][0-9]+))([(][0-9]+[)])?([eE][+-]?[0-9]+)? *\n([\t ]*\n)*)){2}((([ \t]*-?(([0-9]+)[.]?|([0-9]*[.][0-9]+))([(][0-9]+[)])?([eE][+-]?[0-9]+)? +){3})(-?(([0-9]+)[.]?|([0-9]*[.][0-9]+))([(][0-9]+[)])?([eE][+-]?[0-9]+)? *\n?([\t ]*\n)*))[ \t]* | A set of 3x4 matrices separated by spaces and newlines on each line. Final newline optional. Optional spaces at start of lines. Blank lines accepted. |
| 3x4_matrix | char | ((([ \t]*-?(([0-9]+)[.]?|([0-9]*[.][0-9]+))([(][0-9]+[)])?([eE][+-]?[0-9]+)? +){3})?(-?(([0-9]+)[.]?|([0-9]*[.][0-9]+))([(][0-9]+[)])?([eE][+-]?[0-9]+)? *\n([\t ]*\n)*)){2}((([ \t]*-?(([0-9]+)[.]?|([0-9]*[.][0-9]+))([(][0-9]+[)])?([eE][+-]?[0-9]+)? +){3})(-?(([0-9]+)[.]?|([0-9]*[.][0-9]+))([(][0-9]+[)])?([eE][+-]?[0-9]+)? *\n?([\t ]*\n)*))[ \t]* | A 3x4 matrix separated by spaces and newlines on each line. Final newline optional. Optional spaces at start of lines. Blank lines accepted. |
| any | char | .* | A catch all for items that may take any form... |
| asym_id | char | [A-Za-z0-9]+ | A single chain or asym ids. |
| atcode | char | [][ _(),.;:"&<>/\{}'`~!@#$%?+=*A-Za-z0-9|^-]* | Character data type for atom names ... |
| author | char | (([A-Za-z0-9_]+(( |-|'|\. )[A-Za-z0-9_]+)*( Jr.| III)?, [A-Za-z0-9_]\.(-?[A-Za-z0-9_]+\.)*)|(Seattle Structural Genomics Center for Infectious Disease.*)|(Structural Genomics Consortium.*)|(QCRG Structural Biology Consortium.*)|(Center for Structural Genomics of Infectious Diseases.*)) | Author name in PDB format: Taylor, C.A. |
| binary | char | \n--CIF-BINARY-FORMAT-SECTION--\n\ [][ \n\t()_,.;:"&<>/\{}'`~!@#$%?+=*A-Za-z0-9|^-]*\ \n--CIF-BINARY-FORMAT-SECTION---- |
binary items are presented as MIME-like ascii-encoded sections in an imgCIF. In a CBF, raw octet streams are used to convey the same information. |
| boolean | char | YES|NO | Boolean type |
| citation_doi | char | 10\..* | Citation DOI specification. |
| code | char | [][_,.;:"&<>()/\{}'`~!@#$%A-Za-z0-9*|+-]* | code item types/single words ... |
| code30 | char | .?.?.?.?.?.?.?.?.?.?.?.?.?.?.?.?.?.?.?.?.?.?.?.?.?.?.?.?.?.? | A string value, not allowed to exceed 30 characters. |
| date_dep | char | ([1-9][0-9](([02468][048])|([13579][26]))-02-29)|[1-9][0-9][0-9][0-9]-((((0[1-9])|(1[0-2]))-((0[1-9])|(1[0-9])|(2[0-8])))|((((0[13578])|(1[02]))-31)|(((0[1,3-9])|(1[0-2]))-(29|30)))) | Deposition specific date with better checking |
| deposition_email | uchar | [a-zA-Z0-9_.+-]+@[a-zA-Z0-9-]+\.[a-zA-Z0-9.-]+ | code item types/single words (case insensitive) ... |
| ec-type | char | ([1-7]((.[1-9][0-9]?)|(.-))((.[1-9][0-9]?)|(.-))((.[1-9][0-9]?[0-9]?)|(.-)))(([ ]*,[ ]*)([1-7]((.[1-9][0-9]?)|(.-))((.[1-9][0-9]?)|(.-))((.[1-9][0-9]?[0-9]?)|(.-))))* | Approximate format of Enzyme Commission EC number. 1.2.3.4 with optional parts. |
| uchar | [_,.;:"&<>/\{}'`~!@#$%A-Za-z0-9*|+-]* | code item types/single words (case insensitive) ... | |
| emd_id | char | EMD-[0-9]{4,} | EMDB code |
| exp_data_doi | char | 10\.[0-9]{4,9}/[-._;()/:A-Za-z0-9]+ | Experimental dataset DOI |
| fax | uchar | [_,.;:"&<>/\{}'`~!@#$%A-Za-z0-9*|+-]* | code item types/single words (case insensitive) ... |
| float | numb | -?(([0-9]+)[.]?|([0-9]*[.][0-9]+))([(][0-9]+[)])?([eE][+-]?[0-9]+)? | float item types are the subset of numbers that are the floating numbers. |
| float-range | numb | -?(([0-9]+)[.]?|([0-9]*[.][0-9]+))([(][0-9]+[)])?([eE][+-]?[0-9]+)?(--?(([0-9]+)[.]?|([0-9]*[.][0-9]+))([(][0-9]+[)])?([eE][+-]?[0-9]+)?)? | int item types are the subset of numbers that are the floating numbers. |
| id_list | char | [A-Za-z0-9]+(,[A-Za-z0-9]+)* | A list of comma separated chain or asym ids. |
| id_list_spc | char | [ \t]*[A-Za-z0-9]+([ \t]*,[ \t]*[A-Za-z0-9]+)*[ \t]* | A list of comma separated chain or asym ids with optional spaces. |
| idname | uchar | [_A-Za-z0-9]+ | idname item types take the form... |
| int | numb | [+-]?[0-9]+ | int item types are the subset of numbers that are the negative or positive integers. |
| int-range | numb | [+-]?[0-9]+-[+-]?[0-9]+ | range of integer item types are the subset of numbers that are the negative or positive integers. |
| line | char | [][ \t_(),.;:"&<>/\{}'`~!@#$%?+=*A-Za-z0-9|^-]* | char item types / multi-word items ... |
| name | uchar | _[_A-Za-z0-9]+\.[][_A-Za-z0-9%-]+ | name item types take the form... |
| operation_expression | char | [][ \t_(),.;:"&<>/\{}'`~!@#$%?+=*A-Za-z0-9|^-]* | sequence of parenthetical integer ranges and character codes |
| orcid_id | char | [0-9]{4}-[0-9]{4}-[0-9]{4}-([0-9]{3}X|[0-9]{4}) | ORCID pattern - dddd-dddd-dddd-dddd|dddX |
| pdb_id | char | ([1-9][A-Z0-9]{3}|PDB_[A-Z0-9]{8}) | PDB code (upper cases) |
| pdb_id_u | uchar | ([1-9][A-Za-z0-9]{3}|[Pp][Dd][Bb]_[A-Za-z0-9]{8}) | PDB code (case insensitive) |
| pdbx_PDB_obsoleted_db_id | char | [0-9][0-9a-zA-Z]{3}( [0-9][0-9a-zA-Z]{3})* | List of PDB ids for obsoletion - space separated |
| pdbx_related_db_id | char | [][_.:"&<>()/\{}'`~!@#$%A-Za-z0-9*|+-]* | code item types/single words without semi-colon or comma ... |
| phone | uchar | [_,.;:"&<>/\{}'`~!@#$%A-Za-z0-9*|+-]* | code item types/single words (case insensitive) ... |
| point_group | char | (C[1-9][0-9]*|D[2-9]|D[1-9][0-9]+|O|T|I) | Point group symmetry in Schoenflies notation |
| point_group_helical | char | [CD][1-9][0-9]* | Point group symmetry for helices in Schoenflies notation |
| point_symmetry | char | [CD][1-9]|[CD][1-9][0-9]*|T|O|I | Encodes point symmetry as Cn, Dn, T, O, or I (case sensitive), where n is a positive integer. |
| positive_int | numb | [1-9][0-9]* | Positive integers (1,2,3,..) |
| seq-one-letter-code | char | (([\nUGPAVLIMCFYWHKRQNEDSTX]+)?|(\([0-9A-Z][0-9A-Z]?[0-9A-Z]?\))?)+ | One letter code sequence supporting parenthetical modified residues with 3-letter codes |
| sequence_dep | char | [a-zA-Z0-9\t \r\n\v\f\(\)]+$ | Deposition specific one letter code |
| symmetry_operation | char | [-+0-9XxYyZ/ ]+,[-+0-9XxYyZ/ ]+,[-+0-9XxYyZ/ ]+ | Allowed characters for use in symmetry operation such as 1/2-x,y,1/2-z |
| symop | char | ([1-9]|[1-9][0-9]|1[0-8][0-9]|19[0-2])(_[1-9][1-9][1-9])? | symop item types take the form n_klm, where n refers to the symmetry operation that is applied to the coordinates in the ATOM_SITE category identified by _atom_site_label. It must match a number given in _symmetry_equiv_pos_site_id. k, l, and m refer to the translations that are subsequently applied to the symmetry transformed coordinates to generate the atom used. These translations (x,y,z) are related to (k,l,m) by k = 5 + x l = 5 + y m = 5 + z By adding 5 to the translations, the use of negative numbers is avoided. |
| text | char | [][ \n\t()_,.;:"&<>/\{}'`~!@#$%?+=*A-Za-z0-9|^-]* | text item types / multi-line text ... |
| uchar1 | uchar | [+]?[A-Za-z0-9] | data item for 1 character codes |
| uchar3 | uchar | [+]?[A-Za-z0-9][A-Za-z0-9]?[A-Za-z0-9]? | data item for 3 character codes |
| uchar5 | uchar | [+]?[A-Za-z0-9][A-Za-z0-9]?[A-Za-z0-9]?[A-Za-z0-9]?[A-Za-z0-9]? | data item for 5 character codes |
| ucode | uchar | [][_,.;:"&<>()/\{}'`~!@#$%A-Za-z0-9*|+-]* | code item types/single words (case insensitive) ... |
| ucode-alphanum-csv | uchar | [A-Za-z0-9]+(,[A-Za-z0-9]+)? | comma separated alpha numeric codes (single words) (case insensitive) ... |
| uline | uchar | [][ \t_(),.;:"&<>/\{}'`~!@#$%?+=*A-Za-z0-9|^-]* | char item types / multi-word items (case insensitive)... |
| yyyy-mm-dd | char | [0-9]?[0-9]?[0-9][0-9]-[0-9]?[0-9]-[0-9][0-9] | Standard format for CIF dates. |
| yyyy-mm-dd:hh:mm | char | [0-9]?[0-9]?[0-9][0-9]-[0-9]?[0-9](-[0-9]?[0-9])?(:[0-9]?[0-9]:[0-9][0-9])? | Standard format for CIF dates with optional time stamp. |
| yyyy-mm-dd:hh:mm-flex | char | [0-9][0-9][0-9][0-9](-[0-9]?[0-9])?(-[0-9][0-9])?(:[0-9]?[0-9]:[0-9][0-9])? | Flexible date-time format. |
SubCategory List
| SubCategory Identifier | Description |
|---|---|
| cartesian_coordinate | The collection of x, y, and z components of a position specified with reference to a Cartesian (orthogonal angstrom) coordinate system. |
| cartesian_coordinate_esd | The collection of estimated standard deviations of the x, y, and z components of a position specified with reference to a Cartesian (orthogonal angstrom) coordinate system. |
| cell_angle | The collection of alpha, beta, and gamma angles of a unit cell. |
| cell_angle_esd | The collection of estimated standard deviations of the alpha, beta, and gamma angles of a unit cell. |
| cell_length | The collection of a, b, and c axis lengths of a unit cell. |
| cell_length_esd | The collection of estimated standard deviations of the a, b, and c axis lengths of a unit cell. |
| eigendecomposition | The collection of items making up the Eigendecomposition of a matrix. For an n x n matrix, instances of this subcategory will consist of n Eigenvectors of dimension n, and n Eigenvalues. |
| fractional_coordinate | The collection of x, y, and z components of a position specified with reference to unit cell directions. |
| fractional_coordinate_esd | The collection of estimated standard deviations of the x, y, and z components of a position specified with reference to unit cell directions. |
| matrix | The collection of elements of a matrix. |
| miller_index | The collection of h, k, and l components of the Miller index of a reflection. |
| mm_atom_site_auth_label | The collection of asym id, atom id, comp id and seq id components of an author's alternative specification for a macromolecular atom site. |
| mm_atom_site_label | The collection of alt id, asym id, atom id, comp id and seq id components of the label for a macromolecular atom site. |
| mm_poly_res_label | The collection of entity id, comp id and seq id components of the label for a residue in a polymer. |
| unit_vector | The collection of elements of a vector whose norm equals 1. |
| vector | The collection of elements of a vector. |
Units List
| Units Identifier | Description |
|---|---|
| 8pi2_angstroms_squared | 8pi2 * angstroms squared (metres * 10(-10))2 |
| angstroms | angstroms (metres * 10(-10)) |
| angstroms_cubed | angstroms cubed (metres * 10(-10))3 |
| angstroms_degrees | angstroms * degrees |
| angstroms_squared | angstroms squared (metres * 10(-10))2 |
| arbitrary | arbitrary system of units. |
| celsius | degrees (of temperature) Celsius |
| centimetres | centimetres (metres * 10( -2)) |
| counts | counts |
| counts_per_photon | counts per photon |
| degrees | degrees (of arc) |
| degrees_per_minute | degrees (of arc) per minute |
| degrees_squared | degrees squared |
| electron_volts | electron volts |
| electrons | electrons |
| electrons_angstrom_squared | electrons square angstrom |
| electrons_per_angstroms_cubed | electrons per angstroms cubed (electrons/(metres * 10(-10))(-3)) |
| electrons_per_nanometres_cubed | electrons per nanometres cubed (electrons/(metres * 10( -9))(-3)) |
| electrons_per_picometres_cubed | electrons per picometres cubed (electrons/(metres * 10(-12))(-3)) |
| electrons_squared | electrons squared |
| femtometres | femtometres (metres * 10(-15)) |
| femtoseconds | femtoseconds (seconds * 10( -15)) |
| gigapascals | gigapascals |
| hertz | reciprocal seconds |
| hours | hours |
| ions_per_cm_squared_per_sec | ions per centimetre squared per second (ions/(meters * 10(-2))(-2)/second) |
| joules | Joules |
| kelvins | temperature in Kelvin |
| kilodaltons | kilodaltons |
| kilodaltons/nanometer | kilodaltons/nanometer |
| kiloelectron_volts | KeV (electron volts * 10( 3)) |
| kilopascals | kilopascals |
| kilovolts | kilovolts |
| kilowatts | kilowatts |
| megadaltons | megadaltons |
| megagrams_per_cubic_metre | megagrams per cubic metre |
| metres | metres (metres) |
| mg_per_ml | milliliter per milligram |
| microjoules | joules * 10( -6) |
| microliters_per_min | microliters per minute |
| micrometres | micrometres (metres * 10( -6)) |
| micrometres_squared | micrometres squared (metres * 10( -6))2 |
| microns | micrometres (metres * 10( -6)) |
| microns_squared | micrometres squared (metres * 10( -6))2 |
| microseconds | microseconds (seconds * 10( -6)) |
| milliamperes | milliamperes |
| milligrams | grams / 1000 |
| milliliters | liter / 1000 |
| millimetres | millimetres (metres * 10( -3)) |
| millimolar | millimolar |
| milliradians | milliradians (of arc) |
| minutes | minutes |
| ml_per_min | milliliters per minute |
| nanometers | nanometers (metres * 10( -9)) |
| nanometres | nanometres (metres * 10( -9)) |
| nanometres_cubed | nanometres cubed (metres * 10( -9))3 |
| nanometres_squared | nanometres squared (metres * 10( -9))2 |
| nanoseconds | nanoseconds (seconds * 10( -9)) |
| pascals | pascals |
| picometres | picometres (metres * 10(-12)) |
| picometres_cubed | picometres cubed (metres * 10(-12))3 |
| picometres_squared | picometres squared (metres * 10(-12))2 |
| pixels_per_millimetre | pixels per millimetre |
| reciprocal_angstroms | reciprocal angstroms ((metres * 10(-10))(-1)) |
| reciprocal_centimetres | reciprocal centimetres ((metres * 10( -2))(-1)) |
| reciprocal_metres | reciprocal metres (metres(-1)) |
| reciprocal_millimetres | reciprocal millimetres ((metres * 10( -3))(-1)) |
| reciprocal_nanometres | reciprocal nanometres ((metres * 10( -9))(-1)) |
| reciprocal_picometres | reciprocal picometres ((metres * 10(-12))(-1)) |
| reciprocal_seconds | reciprocal seconds (seconds(-1)) |
| seconds | seconds |
| teraphotons_per_pulse | (photons * 10( 12)) per pulse |
| volts | volts |
Units Conversion List
| From Units&Identifier | To Units&Identifier | Operator | Conversion Factor |
|---|---|---|---|
| metres | centimetres | * | 1.0E+02 |
| metres | millimetres | * | 1.0E+03 |
| metres | nanometres | * | 1.0E+09 |
| metres | angstroms | * | 1.0E+10 |
| metres | picometres | * | 1.0E+12 |
| metres | femtometres | * | 1.0E+15 |
| centimetres | millimetres | * | 1.0E+01 |
| centimetres | nanometres | * | 1.0E+07 |
| centimetres | angstroms | * | 1.0E+08 |
| centimetres | picometres | * | 1.0E+10 |
| centimetres | femtometres | * | 1.0E+13 |
| millimetres | centimetres | * | 1.0E-01 |
| millimetres | nanometres | * | 1.0E+06 |
| millimetres | angstroms | * | 1.0E+07 |
| millimetres | picometres | * | 1.0E+09 |
| millimetres | femtometres | * | 1.0E+12 |
| nanometres | centimetres | * | 1.0E-07 |
| nanometres | millimetres | * | 1.0E-06 |
| nanometres | angstroms | * | 1.0E+01 |
| nanometres | picometres | * | 1.0E+03 |
| nanometres | femtometres | * | 1.0E+06 |
| angstroms | centimetres | * | 1.0E-08 |
| angstroms | millimetres | * | 1.0E-07 |
| angstroms | nanometres | * | 1.0E-01 |
| angstroms | picometres | * | 1.0E+02 |
| angstroms | femtometres | * | 1.0E+05 |
| picometres | centimetres | * | 1.0E-10 |
| picometres | millimetres | * | 1.0E-09 |
| picometres | nanometres | * | 1.0E-03 |
| picometres | angstroms | * | 1.0E-02 |
| picometres | femtometres | * | 1.0E+03 |
| femtometres | centimetres | * | 1.0E-13 |
| femtometres | millimetres | * | 1.0E-12 |
| femtometres | nanometres | * | 1.0E-06 |
| femtometres | angstroms | * | 1.0E-05 |
| femtometres | picometres | * | 1.0E-03 |
| reciprocal_centimetres | reciprocal_millimetres | * | 1.0E-01 |
| reciprocal_centimetres | reciprocal_nanometres | * | 1.0E-07 |
| reciprocal_centimetres | reciprocal_angstroms | * | 1.0E-08 |
| reciprocal_centimetres | reciprocal_picometres | * | 1.0E-10 |
| reciprocal_millimetres | reciprocal_centimetres | * | 1.0E+01 |
| reciprocal_millimetres | reciprocal_nanometres | * | 1.0E-06 |
| reciprocal_millimetres | reciprocal_angstroms | * | 1.0E-07 |
| reciprocal_millimetres | reciprocal_picometres | * | 1.0E-09 |
| reciprocal_nanometres | reciprocal_centimetres | * | 1.0E+07 |
| reciprocal_nanometres | reciprocal_millimetres | * | 1.0E+06 |
| reciprocal_nanometres | reciprocal_angstroms | * | 1.0E-01 |
| reciprocal_nanometres | reciprocal_picometres | * | 1.0E-03 |
| reciprocal_angstroms | reciprocal_centimetres | * | 1.0E+08 |
| reciprocal_angstroms | reciprocal_millimetres | * | 1.0E+07 |
| reciprocal_angstroms | reciprocal_nanometres | * | 1.0E+01 |
| reciprocal_angstroms | reciprocal_picometres | * | 1.0E-02 |
| reciprocal_picometres | reciprocal_centimetres | * | 1.0E+10 |
| reciprocal_picometres | reciprocal_millimetres | * | 1.0E+09 |
| reciprocal_picometres | reciprocal_nanometres | * | 1.0E+03 |
| reciprocal_picometres | reciprocal_angstroms | * | 1.0E+01 |
| nanometres_squared | angstroms_squared | * | 1.0E+02 |
| nanometres_squared | picometres_squared | * | 1.0E+06 |
| angstroms_squared | nanometres_squared | * | 1.0E-02 |
| angstroms_squared | picometres_squared | * | 1.0E+04 |
| angstroms_squared | 8pi2_angstroms_squared | * | 78.9568 |
| picometres_squared | nanometres_squared | * | 1.0E-06 |
| picometres_squared | angstroms_squared | * | 1.0E-04 |
| nanometres_cubed | angstroms_cubed | * | 1.0E+03 |
| nanometres_cubed | picometres_cubed | * | 1.0E+09 |
| angstroms_cubed | nanometres_cubed | * | 1.0E-03 |
| angstroms_cubed | picometres_cubed | * | 1.0E+06 |
| picometres_cubed | nanometres_cubed | * | 1.0E-09 |
| picometres_cubed | angstroms_cubed | * | 1.0E-06 |
| kilopascals | gigapascals | * | 1.0E-06 |
| gigapascals | kilopascals | * | 1.0E+06 |
| hours | minutes | * | 6.0E+01 |
| hours | seconds | * | 3.6E+03 |
| hours | microseconds | * | 3.6E+09 |
| minutes | hours | / | 6.0E+01 |
| minutes | seconds | * | 6.0E+01 |
| minutes | microseconds | * | 6.0E+07 |
| seconds | hours | / | 3.6E+03 |
| seconds | minutes | / | 6.0E+01 |
| seconds | microseconds | * | 1.0E+06 |
| microseconds | hours | / | 3.6E+09 |
| microseconds | minutes | / | 6.0E+07 |
| microseconds | seconds | / | 1.0E+06 |
| celsius | kelvins | - | 273.0 |
| kelvins | celsius | + | 273.0 |
| electrons_per_nanometres_cubed | electrons_per_angstroms_cubed | * | 1.0E+03 |
| electrons_per_nanometres_cubed | electrons_per_picometres_cubed | * | 1.0E+09 |
| electrons_per_angstroms_cubed | electrons_per_nanometres_cubed | * | 1.0E-03 |
| electrons_per_angstroms_cubed | electrons_per_picometres_cubed | * | 1.0E+06 |
| electrons_per_picometres_cubed | electrons_per_nanometres_cubed | * | 1.0E-09 |
| electrons_per_picometres_cubed | electrons_per_angstroms_cubed | * | 1.0E-06 |