Data Item _ihm_cross_link_list.linker_type

General

Item name
_ihm_cross_link_list.linker_type
Category name
ihm_cross_link_list
Attribute name
linker_type
Required in PDB entries
yes
Used in currrent PDB entries
No

Item Description

The type of crosslinker used.

Data Type

Data type code
line
Data type detail
char item types / multi-word items ...
Primitive data type code
char
Regular expression
[][ \t_(),.;:"&<>/\{}'`~!@#$%?+=*A-Za-z0-9|^-]*

Controlled Vocabulary

Allowed Value Details
BMSO bismaleimide sulfoxide crosslinker
BS2G Bis-(sulfosuccinimidyl) glutarate crosslinker
BS3 bis(sulfosuccinimidyl) suberate crosslinker
BSP Bis(succinimidyl) penta(ethylene glycol) crosslinker
BrdU 5-bromo-2'-deoxyuridine
CDI 1,1'-carbonyldiimidazole
CYS Cysteine crosslinker
DHSO dihydrazide sulfoxide crosslinker
DSA DiSuccinimidyl Adipate
DSG disuccinimidyl glutarate crosslinker
DSS disuccinimidyl suberate (DSS) crosslinker
DSSO disuccinimidyl sulfoxide (DSSO) crosslinker
DST disuccinimidyl tartrate crosslinker
EDC 1-ethyl-(dimethylaminopropyl) carbodiimide hydrochloride (EDC) crosslinker
EGS ethylene glycol bis(succinimidyl succinate) crosslinker
LCSDA succinimidyl 6-(4,4'-azipentanamido)hexanoate
Other Other type of crosslinker
SDA succinimidyl 4,4'-azipentanoate
sulfo-SDA sulfosuccinimidyl 4,4'-azipentanoate, heterobifunctional crosslinker
sulfo-SMCC sulfosuccinimidyl 4-(N-maleimidomethyl)cyclohexane-1-carboxylate crosslinker

Controlled Vocabulary at Deposition

Allowed Value Details
BMSO bismaleimide sulfoxide crosslinker
BS2G Bis-(sulfosuccinimidyl) glutarate crosslinker
BS3 bis(sulfosuccinimidyl) suberate crosslinker
BSP Bis(succinimidyl) penta(ethylene glycol) crosslinker
BrdU 5-bromo-2'-deoxyuridine
CDI 1,1'-carbonyldiimidazole
CYS Cysteine crosslinker
DHSO dihydrazide sulfoxide crosslinker
DSA DiSuccinimidyl Adipate
DSG disuccinimidyl glutarate crosslinker
DSS disuccinimidyl suberate (DSS) crosslinker
DSSO disuccinimidyl sulfoxide (DSSO) crosslinker
DST disuccinimidyl tartrate crosslinker
EDC 1-ethyl-(dimethylaminopropyl) carbodiimide hydrochloride (EDC) crosslinker
EGS ethylene glycol bis(succinimidyl succinate) crosslinker
LCSDA succinimidyl 6-(4,4'-azipentanamido)hexanoate
Other Other type of crosslinker
SDA succinimidyl 4,4'-azipentanoate
sulfo-SDA sulfosuccinimidyl 4,4'-azipentanoate, heterobifunctional crosslinker
sulfo-SMCC sulfosuccinimidyl 4-(N-maleimidomethyl)cyclohexane-1-carboxylate crosslinker