Data Item _pdbx_modification_feature.type

General

Item name
_pdbx_modification_feature.type
Category name
pdbx_modification_feature
Attribute name
type
Required in PDB entries
yes
Used in currrent PDB entries
No

Item Description

The type of protein modification.

Item Example

 Phosphorylation

Data Type

Data type code
line
Data type detail
char item types / multi-word items ...
Primitive data type code
char
Regular expression
[][ \t_(),.;:"&<>/\{}'`~!@#$%?+=*A-Za-z0-9|^-]*

Controlled Vocabulary

Allowed Value Details
(3-Aminopropyl)(5'-adenosyl)phosphono amidation
(3R)-3-Hydroxybutyrylation
12-Hydroxyfarnesylation
12-Oxomyristoylation
12R-Hydroxymyristoylation
14-Hydroxy-10,13-dioxo-7-heptadecenoic acid
2,3-Dicarboxypropylation
2-Aminoadipylation
2-Aminoethylphosphorylation
2-Cholinephosphorylation
2-Hydroxyisobutyrylation
2-Oxo-5,5-dimethylhexanoylation
2-Oxobutanoic acid
3-Oxoalanine
3-Phenyllactic acid
4-Phosphopantetheine
ADP-ribosylation
ADP-riboxanation
AMPylation
Acetamidation
Acetamidomethylation
Acetylation
Alanylation
Allysine
Amination
Arachidoylation
Archaeol
Arginylation
Arsenylation
Asparaginylation
Aspartylation
Bacillithiolation
Benzoylation
Benzylation
Beta-amino acid
Beta-hydroxybutyrylation
Beta-lysylation
Beta-mercaptoethanol
Biotinylation
Bromination
Butyrylation
Carbamoylation
Carboxyethylation
Carboxylation
Carboxymethylation
Chlorination
Cholesterylation
Citrullination
Crotonylation
Cyanation
Cysteinylation
D-alanylation
D-arginylation
D-asparaginylation
D-aspartylation
D-cysteinylation
D-glutaminylation
D-glutamylation
D-histidinylation
D-isoleucylation
D-lactate
D-leucylation
D-lysylation
D-methionylation
D-phenylalanylation
D-prolylation
D-serylation
D-threoninylation
D-tryptophanylation
D-tyrosination
D-valylation
Deamidation
Decanoylation
Decarboxylation
Dehydroamino acid
Dehydrocoelenterazination
Dehydrogenation
Dehydroxylation
Deoxidation
Deoxyhypusine
Diacylglycerol
Dihydroxyacetonation
Diphosphorylation
Diphthamide
Dipyrromethane methylation
Dopaminylation
Ethylation
Ethylsulfanylation
Farnesylation
Fluorination
Formylation
GMPylation
Geranylgeranylation
Glutaminylation
Glutamylation
Glutarylation
Glutathionylation
Glycerophosphorylation
Glycerylphosphorylethanolamination
Glycylation
Heptanoylation
Hexanoylation
Histaminylation
Histidinylation
Hydrogenation
Hydroperoxylation
Hydroxyamination
Hydroxyethylation
Hydroxylation
Hydroxymethylation
Hydroxysulfanylation
Hypusine
Iodination
Isoleucylation
L-lactate
Lactoylation
Laurylation
Leucylation
Lipoylation
Lysylation
Malonylation
Methionylation
Methoxylation
Methylamination
Methylation
Methylsulfanylation
Methylsulfation
Myristoylation
N-methylcarbamoylation
N-pyruvic acid 2-iminylation
Nitration
Nitrosylation
None
Noradrenylation
Norleucine
Norvaline
Octanoylation
Oleoylation
Ornithine
Oxidation
Palmitoleoylation
Palmitoylation
Pentadecanoylation
Pentanoylation
Phenylalanylation
Phosphatidylethanolamine amidation
Phosphoenolpyruvate
Phosphorylation
Prolylation
Propionylation
Pyridoxal phosphate
Pyrrolidone carboxylic acid
Pyruvic acid
Retinoylation
Selanylation
Selenomethionine
Serotonylation
Serylation
Stearoylation
Stereoisomerisation
Succinamide ring
Succination
Succinylation
Sulfanylmethylation
Sulfation
Sulfhydration
Tert-butylation
Tert-butyloxycarbonylation
Threoninylation
Thyroxine
Triiodothyronine
Tryptophanylation
Tyrosination
UMPylation
Valylation
cGMPylation

Controlled Vocabulary at Deposition

Allowed Value Details
(3-Aminopropyl)(5'-adenosyl)phosphono amidation
(3R)-3-Hydroxybutyrylation
12-Hydroxyfarnesylation
12-Oxomyristoylation
12R-Hydroxymyristoylation
14-Hydroxy-10,13-dioxo-7-heptadecenoic acid
2,3-Dicarboxypropylation
2-Aminoadipylation
2-Aminoethylphosphorylation
2-Cholinephosphorylation
2-Hydroxyisobutyrylation
2-Oxo-5,5-dimethylhexanoylation
2-Oxobutanoic acid
3-Oxoalanine
3-Phenyllactic acid
4-Phosphopantetheine
ADP-ribosylation
ADP-riboxanation
AMPylation
Acetamidation
Acetamidomethylation
Acetylation
Alanylation
Allysine
Amination
Arachidoylation
Archaeol
Arginylation
Arsenylation
Asparaginylation
Aspartylation
Bacillithiolation
Benzoylation
Benzylation
Beta-amino acid
Beta-hydroxybutyrylation
Beta-lysylation
Beta-mercaptoethanol
Biotinylation
Bromination
Butyrylation
Carbamoylation
Carboxyethylation
Carboxylation
Carboxymethylation
Chlorination
Cholesterylation
Citrullination
Crotonylation
Cyanation
Cysteinylation
D-alanylation
D-arginylation
D-asparaginylation
D-aspartylation
D-cysteinylation
D-glutaminylation
D-glutamylation
D-histidinylation
D-isoleucylation
D-lactate
D-leucylation
D-lysylation
D-methionylation
D-phenylalanylation
D-prolylation
D-serylation
D-threoninylation
D-tryptophanylation
D-tyrosination
D-valylation
Deamidation
Decanoylation
Decarboxylation
Dehydroamino acid
Dehydrocoelenterazination
Dehydrogenation
Dehydroxylation
Deoxidation
Deoxyhypusine
Diacylglycerol
Dihydroxyacetonation
Diphosphorylation
Diphthamide
Dipyrromethane methylation
Dopaminylation
Ethylation
Ethylsulfanylation
Farnesylation
Fluorination
Formylation
GMPylation
Geranylgeranylation
Glutaminylation
Glutamylation
Glutarylation
Glutathionylation
Glycerophosphorylation
Glycerylphosphorylethanolamination
Glycylation
Heptanoylation
Hexanoylation
Histaminylation
Histidinylation
Hydrogenation
Hydroperoxylation
Hydroxyamination
Hydroxyethylation
Hydroxylation
Hydroxymethylation
Hydroxysulfanylation
Hypusine
Iodination
Isoleucylation
L-lactate
Lactoylation
Laurylation
Leucylation
Lipoylation
Lysylation
Malonylation
Methionylation
Methoxylation
Methylamination
Methylation
Methylsulfanylation
Methylsulfation
Myristoylation
N-methylcarbamoylation
N-pyruvic acid 2-iminylation
Nitration
Nitrosylation
None
Noradrenylation
Norleucine
Norvaline
Octanoylation
Oleoylation
Ornithine
Oxidation
Palmitoleoylation
Palmitoylation
Pentadecanoylation
Pentanoylation
Phenylalanylation
Phosphatidylethanolamine amidation
Phosphoenolpyruvate
Phosphorylation
Prolylation
Propionylation
Pyridoxal phosphate
Pyrrolidone carboxylic acid
Pyruvic acid
Retinoylation
Selanylation
Selenomethionine
Serotonylation
Serylation
Stearoylation
Stereoisomerisation
Succinamide ring
Succination
Succinylation
Sulfanylmethylation
Sulfation
Sulfhydration
Tert-butylation
Tert-butyloxycarbonylation
Threoninylation
Thyroxine
Triiodothyronine
Tryptophanylation
Tyrosination
UMPylation
Valylation
cGMPylation