Data Category software

General

Category name
software
Required in PDB entries
no
Category group membership
computing_group
Used in current PDB entries
Yes, in about 90.2 % of entries

Category Relationship Diagrams

70
View full category relationship diagram including all dictionary data categories
70
View abbreviated category relationship diagram including only those categories used in current PDB entries.

Category Description

               Data items in the SOFTWARE category record details about
               the software used in the structure analysis, which implies
               any software used in the generation of any data items
               associated with the structure determination and
               structure representation.

               These data items allow computer programs to be referenced
               in more detail than data items in the COMPUTING category do.

Category Example

 
    loop_
    _software.pdbx_ordinal
    _software.name
    _software.version
    _software.date
    _software.type
    _software.contact_author
    _software.contact_author_email
    _software.location
    _software.classification
    _software.citation_id
    _software.language
    _software.compiler_name
    _software.compiler_version
    _software.hardware
    _software.os
    _software.os_version
    _software.dependencies
    _software.mods
    _software.description
    1   Prolsq   unknown  .   program   'Wayne A. Hendrickson'  ?
       'ftp://rosebud.sdsc.edu/pub/sdsc/xtal/CCP4/ccp4/'
        refinement ref5  Fortran
       'Convex Fortran' v8.0 'Convex C220' ConvexOS  v10.1
       'Requires that Protin be run first'    optimized
       'restrained least-squares refinement'

Key Data Items