Data Item _em_software.name

General

Item name
_em_software.name
Category name
em_software
Attribute name
name
Required in PDB entries
no
Used in current PDB entries
Yes, in about 1.1 % of entries

Item Description

The name of the software package used, e.g., RELION. Depositors are strongly encouraged to provide a value in this field.
 EMAN
 Imagic
 Spider
 Bsoft
 UCSF-Chimera

Data Type

Data type code
line
Data type detail
char item types / multi-word items ...
Primitive data type code
char
Regular expression
[][ \t_(),.;:"&<>/\{}'`~!@#$%?+=*A-Za-z0-9|^-]*

Controlled Vocabulary at Deposition

Allowed Value Details
3dmod .
ADP_EM .
AIMLESS .
AV3 .
Amber .
AmiraFPM .
Appion .
Auto3DEM .
BUSTER .
Bsoft .
Buccaneer .
Build_Fspace .
CCP4 package .
CNS .
CTFFIND .
CTFPHASEFLIP .
CTFTILT .
Coot .
Cow .
CryoSPARC .
DE-IM .
DigitalMicrograph .
DireX .
DoG Picker .
Dynamo .
EM-Menu .
EM-Tools .
EM3DR .
EMAN .
EMAN2 .
EMPFT .
EMfit .
EPU .
ETHAN .
FOCUS .
FREALIGN .
FREALIX .
FindEM .
FitCTF2 .
Flex-EM .
Gautomatch .
Gctf .
Gorgon .
HADDOCK .
I-TASSER .
IHRSR .
IMAGIC .
IMIRS .
IMOD .
IMP .
J3DR .
JALIGN .
JSUBTOMO .
LIBG .
Latitude .
Leginon .
MATLAB .
MDFF .
MODELLER .
MOLREP .
MPSA .
MRC IMAGE PROCESSING PACKAGE .
MotionCorr2 .
NAMD .
NOVACTF .
O .
PEET .
PHENIX .
POINTLESS .
PRIISM/IVE .
PRIME .
PROTOMO .
Pathwalking .
PowerFit .
PyMOL .
PyTom .
RAPTOR .
REFMAC .
RELION .
RSRef .
Refine_Fspace .
ResMap .
RobEM .
Rosetta .
RosettaEM .
Ruby-Helix .
SHELXD .
SIMPLE .
SPARX .
SPHIRE .
SPIDER .
SPRING .
SUPER .
Scipion .
Sculptor .
SerialEM .
Signature .
Situs .
Super-sampling SART .
TEMPy .
TOM .
TOM Toolbox .
TOMO3D .
TOMOCTF .
Topaz .
UCSF Chimera .
UCSF Tomography .
UCSFImage .
UCSFImage4 .
URO .
VMD .
Warp .
X-PLOR .
X3D .
Xmipp .
cisTEM .
cryoSPARC .
ctfit .
eTomo .
emClarity .
hsearch_lorentz .
iMODFIT .
jspr .