Data Item _em_software.name

General

Item name
_em_software.name
Category name
em_software
Attribute name
name
Required in PDB entries
no
Used in current PDB entries
Yes, in about 1.1 % of entries

Item Description

The name of the software package used, e.g., RELION. Depositors are strongly encouraged to provide a value in this field.
 EMAN
 Imagic
 Spider
 Bsoft
 UCSF-Chimera

Data Type

Data type code
line
Data type detail
char item types / multi-word items ...
Primitive data type code
char
Regular expression
[][ \t_(),.;:"&<>/\{}'`~!@#$%?+=*A-Za-z0-9|^-]*

Controlled Vocabulary at Deposition

Allowed Value Details
3dmod
ADP_EM
AIMLESS
AV3
Amber
AmiraFPM
Appion
Auto3DEM
BUSTER
Bsoft
Buccaneer
Build_Fspace
CCP4 package
CNS
CTFFIND
CTFPHASEFLIP
CTFTILT
Coot
Cow
CryoSPARC
DE-IM
DigitalMicrograph
DireX
DoG Picker
Dynamo
EM-Menu
EM-Tools
EM3DR
EMAN
EMAN2
EMPFT
EMfit
EPU
ERRASER
ETHAN
FOCUS
FREALIGN
FREALIX
FindEM
FitCTF2
Flex-EM
Gautomatch
Gctf
Gorgon
HADDOCK
I-TASSER
IHRSR
IMAGIC
IMIRS
IMOD
IMP
J3DR
JALIGN
JSUBTOMO
LIBG
Latitude
Leginon
MATLAB
MDFF
MODELLER
MOLREP
MPSA
MRC IMAGE PROCESSING PACKAGE
MotionCorr2
NAMD
NOVACTF
O
PEET
PHENIX
POINTLESS
PRIISM/IVE
PRIME
PROTOMO
Pathwalking
PowerFit
PyMOL
PyTom
RAPTOR
REFMAC
RELION
RSRef
Refine_Fspace
ResMap
RobEM
Rosetta
RosettaEM
Ruby-Helix
SHELXD
SIMPLE
SPARX
SPHIRE
SPIDER
SPRING
SUPER
Scipion
Sculptor
SerialEM
Signature
Situs
Super-sampling SART
TEMPy
TOM
TOM Toolbox
TOMO3D
TOMOCTF
Topaz
UCSF Chimera
UCSF Tomography
UCSFImage
UCSFImage4
URO
VMD
Warp
X-PLOR
X3D
Xmipp
cisTEM
cryoSPARC
ctfit
eTomo
emClarity
hsearch_lorentz
iMODFIT
jspr