Supporting Data mmcif_ma.dic

Dictionary Revision History

Version Revision Date Revision Description
1.2.1 2018-07-18
Changes (jh/bv/jw/gt/sb)
+ Added MA_POLY_TEMPLATE_LIBRARY_DETAILS, MA_POLY_TEMPLATE_LIBRARY_LIST
+ Added MA_POLY_TEMPLATE_LIBRARY_COMPONENTS
+ Updated _item_sub_category.id for matrices and vectors
1.2.0 2018-07-17
Changes (jh/bv/jw/gt/sb)
+ Added MA_ALIGNMENT_INFO, MA_TARGET_ENTITY_INSTANCE
+ Revised MA_TEMPLATE_DETAILS, MA_TARGET_TEMPLATE_POLY_MAPPING, MA_ALIGNMENT_DETAILS
1.1.9 2018-07-16
Changes (jh/bv/jw/gt/sb)
+ Revised MA_TEMPLATE_POLY_SEGMENT, MA_TARGET_TEMPLATE_POLY_MAPPING, MA_ALIGNMENT_DETAILS
1.1.8 2018-07-16
Changes (jh/bv/jw/gt/sb)
+ Addressed requirements for coevolution MSA and predicted contacts
1.1.7 2018-07-13
Changes (jh/bv/jw/gt/sb)
+ Revised MA_TEMPLATE_DETAILS, MA_TEMPLATE_POLY_SEGMENT, MA_TEMPLATE_POLY, MA_TEMPLATE_POLY_SEGMENT
+ Added MA_TEMPLATE_NON_POLY, MA_TEMPLATE_CUSTOMIZED
1.1.6 2018-07-12
Changes (jh/bv/jw/gt/sb)
+ Revised MA_ALIGNMENT_DETAILS, MA_PROTOCOL_STEP, MA_TARGET_TEMPLATE_MAPPING
+ Added MA_SOFTWARE_PARAMETER
1.1.5 2018-07-11
Changes (jh/bv/jw/gt/sb)
+ Revised MA_TARGET_TEMPLATE_MAPPING, MA_ALIGNMENT_DETAILS, MA_TEMPLATE_DETAILS
+ Revised MA_PDB_TEMPLATE, MA_TEMPLATE_COORD
+ Added MA_TEMPLATE_POLY_SEGMENT
1.1.4 2018-07-10
Changes (jh/bv/jw/gt/sb)
+ Added MA_TARGET_TEMPLATE_MAPPING, MA_PDB_TEMPLATE_TRANS_MATRIX, MA_TARGET_STRUCT
+ Removed MA_STEP_CRITERIA
1.1.3 2018-07-10
Changes (jh/bv/jw/gt/sb)
+ Added MA_PDB_TEMPLATE, MA_TARGET_REF_DB_DETAILS, MA_DATA_GROUP
1.1.2 2018-07-09
Changes (jh/bv/jw/gt/sb)
+ Updated MA_MODEL_LIST, MA_STRUCT_ASSEMBLY, MA_PROTCOL_STEP
+ Removed MA_STEP_INPUT, MA_STEP_OUTPUT
1.1.1 2018-07-06
Changes (jh/bv)
+ Release as initial version 1.1.1
Data Type Code Primitive Type Code Regular Expression Description
code char [][_,.;:"&<>()/\{}'`~!@#$%A-Za-z0-9*|+-]* code item types/single words ...
float numb -?(([0-9]+)[.]?|([0-9]*[.][0-9]+))([(][0-9]+[)])?([eE][+-]?[0-9]+)? float item types are the subset of numbers that are the floating
numbers.
int numb [+-]?[0-9]+ int item types are the subset of numbers that are the negative
or positive integers.
line char [][ \t_(),.;:"&<>/\{}'`~!@#$%?+=*A-Za-z0-9|^-]* char item types / multi-word items ...
name uchar _[_A-Za-z0-9]+\.[][_A-Za-z0-9%-]+ name item types take the form...
text char [][ \n\t()_,.;:"&<>/\{}'`~!@#$%?+=*A-Za-z0-9|^-]* text item types / multi-line text ...
ucode uchar [][_,.;:"&<>()/\{}'`~!@#$%A-Za-z0-9*|+-]* code item types/single words (case insensitive) ...
uline uchar [][ \t_(),.;:"&<>/\{}'`~!@#$%?+=*A-Za-z0-9|^-]* char item types / multi-word items (case insensitive)...
SubCategory Identifier Description
Units Identifier Description
8pi2_angstroms_squared 8pi2 * Angstroms squared (metres * 10(-10))2
angstroms Angstroms (metres * 10(-10))

Units Conversion List

From Units&Identifier To Units&Identifier Operator Conversion Factor